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gwc2_scaffold_40

Alias: PER_GWC2_39_17_1

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Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc2_scaffold_40_1
zPERA2_38_36, Peregrinibacteria, Bacteria

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1..285
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein, conserved in Plasmodium species Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=28 to=39)
coiled-coil (db=Coil db_id=coil from=20 to=73 evalue=NA)
gwc2_scaffold_40_2
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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292..2808
-----------------
DNA (2517bp)
protein (839aa)
Glycosyl transferase, group 1 n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ALS1_MARMM rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:KKR07058.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
group 1 glycosyl transferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=476 to=825 evalue=1.2e-21)
gwc2_scaffold_40_3
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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2818..3651
-----------------
DNA (834bp)
protein (278aa)
Putative uncharacterized protein n=2 Tax=Eubacteriaceae bacterium CM5 RepID=G9XCE5_9FIRM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KKR07059.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
NAD-dependent epimerase/dehydratase
seg (db=Seg db_id=seg from=13 to=27)
gwc2_scaffold_40_4
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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3661..4674
-----------------
DNA (1014bp)
protein (338aa)
Protein WcbK, GDPmannose 4,6-dehydratase {ECO:0000313|EMBL:KKR07060.1}; EC=4.2.1.47 {ECO:0000313|EMBL:KKR07060.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bact
Putative uncharacterized protein n=2 Tax=Eubacteriaceae bacterium CM5 RepID=G9XCE6_9FIRM rbh
GDP-mannose 4,6-dehydratase
GDP MANNOSE-4,6-DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF32 from=8 to=331 evalue=2.8e-90 interpro_id=IPR006368 interpro_description=GDP-mannose 4,6-dehydratase GO=Cellular Component: intracellular (GO:0005622), Molecular Function: GDP-mannose 4,6-dehydratase activity (GO:0008446), Biological Process: GDP-mannose metabolic process (GO:0019673))
gwc2_scaffold_40_5
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(4690..5238)
-----------------
DNA (549bp)
protein (183aa)
D,D-heptose 1,7-bisphosphate phosphatase, D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase {ECO:0000313|EMBL:KKR07061.1}; EC=3.1.3.- {ECO:0000313|EMBL:KKR07061.1};; EC=3.1.3.82 {ECO:0000313|EMBL
D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QP78_PERMH
Histidinol-ppas: histidinol-phosphate (db=HMMTigr db_id=TIGR01656 from=4 to=154 evalue=1.3e-29 interpro_id=IPR006543 interpro_description=Histidinol-phosphate phosphatase GO=Molecular Function: phosphatase activity (GO:0016791))
gwc2_scaffold_40_6
zPERA2_38_36, Peregrinibacteria, Bacteria

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comp(5228..5758)
-----------------
DNA (531bp)
protein (177aa)
Phosphoheptose isomerase n=3 Tax=Methanocaldococcaceae RepID=N6VNZ1_9EURY
Probable phosphoheptose isomerase Tax=zPERA2_38_36
phosphoheptose isomerase
seg (db=Seg db_id=seg from=24 to=37)
gwc2_scaffold_40_7
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists


comp(5703..6845)
-----------------
DNA (1143bp)
protein (381aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IAG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKR07063.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
kinase, galactokinase/mevalonate kinase
seg (db=Seg db_id=seg from=199 to=209)
gwc2_scaffold_40_8
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(6805..7506)
-----------------
DNA (702bp)
protein (234aa)
Nucleotidyl transferase, mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KKR07064.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KKR07064.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source
Nucleotidyl transferase n=6 Tax=Clostridium thermocellum RepID=A3DK29_CLOTH
nucleotidyltransferase
MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF15 from=8 to=209 evalue=1.5e-44)
gwc2_scaffold_40_9
zPERA2_38_36, Peregrinibacteria, Bacteria

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7584..9002
-----------------
DNA (1419bp)
protein (473aa)
AlgI n=6 Tax=Bacillus cereus group RepID=B7HG95_BACC4 rbh
AlgI {ECO:0000313|EMBL:KKQ72088.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
AlgI protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
gwc2_scaffold_40_10
zPERA2_38_36, Peregrinibacteria, Bacteria

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9157..10404
-----------------
DNA (1248bp)
protein (416aa)
Alginate O-acetylation protein AlgJ n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RYC9_9FIRM
Uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
seg (db=Seg db_id=seg from=136 to=147)
gwc2_scaffold_40_11
zPERA2_38_36, Peregrinibacteria, Bacteria

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10408..11370
-----------------
DNA (963bp)
protein (321aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWB4_9BACT rbh
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KKQ72090.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
dTDP-glucose 4,6-dehydratase
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=317 evalue=1.9e-92)
gwc2_scaffold_40_12
zPERA2_38_36, Peregrinibacteria, Bacteria

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11349..12245
-----------------
DNA (897bp)
protein (299aa)
Glycosyltransferase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RDE9_METFO
Glycosyltransferase Tax=zPERA2_38_36
glycosyl transferase family protein
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=13 to=74 evalue=1.2e-05)
gwc2_scaffold_40_13
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(12242..13291)
-----------------
DNA (1050bp)
protein (350aa)
Glycosyl transferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FX3_METBF
Glycosyl transferase {ECO:0000313|EMBL:KKR07069.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
glycosyl transferase family protein
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR22916 from=12 to=338 evalue=1.5e-13)
gwc2_scaffold_40_14
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(13300..13677)
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein MJ1580 n=2 Tax=Methanocaldococcus RepID=Y1580_METJA
Uncharacterized protein {ECO:0000313|EMBL:KKR07070.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
gwc2_scaffold_40_15
zPERA2_38_36, Peregrinibacteria, Bacteria

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comp(13680..14351)
-----------------
DNA (672bp)
protein (224aa)
Glycosyl transferase family 2 n=2 Tax=Methanotorris RepID=F6BCT2_METIK
Glycosyl transferase family 2 Tax=zPERA2_38_36
family 2 glycosyl transferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=190 evalue=2.4e-31)
gwc2_scaffold_40_16
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

14426..16375
-----------------
DNA (1950bp)
protein (650aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR07072.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=57 to=78)
coiled-coil (db=Coil db_id=coil from=617 to=638 evalue=NA)
gwc2_scaffold_40_17
zPERA2_38_36, Peregrinibacteria, Bacteria

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16323..17015
-----------------
DNA (693bp)
protein (231aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0T5_CALAS
Non-canonical purine NTP pyrophosphatase Tax=zPERA2_38_36
putative non-canonical purine NTP pyrophosphatase
seg (db=Seg db_id=seg from=220 to=227)
gwc2_scaffold_40_18
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(16972..18372)
-----------------
DNA (1401bp)
protein (467aa)
Putative uncharacterized protein n=1 Tax=Selaginella moellendorffii RepID=D8T1I1_SELML
Putative uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=361 to=383)
gwc2_scaffold_40_19
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

18504..18908
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR07075.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=12 to=31)
gwc2_scaffold_40_20
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

18914..20587
-----------------
DNA (1674bp)
protein (558aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR07076.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
coiled-coil (db=Coil db_id=coil from=235 to=263 evalue=NA)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=525 to=555 evalue=0.0001)
gwc2_scaffold_40_21
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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20596..21798
-----------------
DNA (1203bp)
protein (401aa)
Acyltransferase 3 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MSN7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR07077.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
acyltransferase 3
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwc2_scaffold_40_22
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(21773..22108)
-----------------
DNA (336bp)
protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR07078.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
gwc2_scaffold_40_23
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(22121..23386)
-----------------
DNA (1266bp)
protein (422aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR07079.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
Major facilitator superfamily MFS_1
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
seg (db=Seg db_id=seg from=183 to=195)
gwc2_scaffold_40_24
zPERA2_38_36, Peregrinibacteria, Bacteria

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23490..24176
-----------------
DNA (687bp)
protein (229aa)
Tax=zPERA2_38_36
gwc2_scaffold_40_25
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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24312..31607
-----------------
DNA (7296bp)
protein (2432aa)
Fibronectin type III domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE33_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:KKR07081.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwc2_scaffold_40_26
zPERA2_38_36, Peregrinibacteria, Bacteria

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31784..32932
-----------------
DNA (1149bp)
protein (383aa)
CYTH-like domain Tax=zPERA2_38_36
CYTH-like phosphatases (db=superfamily db_id=SSF55154 from=210 to=380 evalue=1.1e-08 interpro_id=IPR023577 interpro_description=CYTH-like domain)
gwc2_scaffold_40_27
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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33016..33243
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR07083.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
(db=HMMPfam db_id=PF01402 from=5 to=35 evalue=0.00012 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
gwc2_scaffold_40_28
zPERA2_38_36, Peregrinibacteria, Bacteria

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33245..33511
-----------------
DNA (267bp)
protein (89aa)
Plasmid stabilization system protein n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E7K3_9FIRM
UPI00020A997B related cluster Tax=zPERA2_38_36
plasmid stabilization protein
RelE-like (db=superfamily db_id=SSF143011 from=4 to=84 evalue=3.8e-14)
gwc2_scaffold_40_29
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

33529..33690
-----------------
DNA (162bp)
protein (54aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=5 to=23)
gwc2_scaffold_40_30
zPERA2_38_36, Peregrinibacteria, Bacteria

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comp(33701..34081)
-----------------
DNA (381bp)
protein (127aa)
Tax=zPERA2_38_36
Displaying items 1-30 of 176 in total

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