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gwc2_scaffold_446

Alias: PER_GWC2_39_17_7

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Displaying items 1-30 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc2_scaffold_446_1
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(3..1472)
-----------------
DNA (1470bp)
protein (490aa)
Dipeptide ABC transporter, substrate-binding protein n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q8P0_SULNB
Dipeptide ABC transporter substrate-binding protein, peptide/nickel transport system substrate-binding protein {ECO:0000313|EMBL:KKR05292.1}; Flags: Fragment;; TaxID=1619062 species="Bacteria; Peregri
Extracellular solute-binding protein family 5
seg (db=Seg db_id=seg from=335 to=350)
gwc2_scaffold_446_2
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(1573..3390)
-----------------
DNA (1818bp)
protein (606aa)
Elongation factor 4 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=LEPA_CARHZ rbh
GTP-binding protein LepA, GTP-binding protein LepA {ECO:0000313|EMBL:KKR05293.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
lepA; GTP-binding protein LepA
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=47 to=62 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
gwc2_scaffold_446_3
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

3551..3994
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05294.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
gwc2_scaffold_446_4
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

4017..4721
-----------------
DNA (705bp)
protein (235aa)
Putative uncharacterized protein n=2 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS15_9BACT
Type IV secretory pathway VirB4 protein Tax=PER_GWF2_38_29
hypothetical protein
gwc2_scaffold_446_5
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists


comp(4724..5095)
-----------------
DNA (372bp)
protein (124aa)
30S ribosomal protein S1 n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SWV2_PLAL2
30S ribosomal protein S1 {ECO:0000313|EMBL:KKR05296.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=103 to=113)
(db=HMMPfam db_id=PF00575 from=25 to=101 evalue=1.0e-11 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723))
gwc2_scaffold_446_6
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(5226..5645)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05297.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=4 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
gwc2_scaffold_446_7
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(5656..5994)
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U8K6_CROAH
Uncharacterized protein {ECO:0000313|EMBL:KKR05298.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
gwc2_scaffold_446_8
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(6049..6405)
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05299.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_446_9
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(6414..6683)
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05300.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_446_10
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(6676..7017)
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05301.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_446_11
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(10916..11158)
-----------------
DNA (243bp)
protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05302.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=46 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
gwc2_scaffold_446_12
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(11380..11760)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05303.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_446_13
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(11857..12978)
-----------------
DNA (1122bp)
protein (374aa)
RNA methylase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RQE7_9PLAN
RNA methylase {ECO:0000313|EMBL:KKR05304.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=244 to=263)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=101 to=261 evalue=1.0e-14)
gwc2_scaffold_446_14
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(13029..13976)
-----------------
DNA (948bp)
protein (316aa)
Permease n=2 Tax=Desulfotomaculum RepID=F0DMY8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR05305.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
seg (db=Seg db_id=seg from=34 to=55)
gwc2_scaffold_446_15
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(14040..14837)
-----------------
DNA (798bp)
protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05306.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_446_16
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

15504..16175
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05307.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
gwc2_scaffold_446_17
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

16344..16511
-----------------
DNA (168bp)
protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05308.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_446_18
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

16667..16942
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05309.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_446_19
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(16950..18188)
-----------------
DNA (1239bp)
protein (413aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GFP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKR05310.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
multidrug ABC transporter substrate-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
gwc2_scaffold_446_20
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(18191..18907)
-----------------
DNA (717bp)
protein (239aa)
ABC transporter related n=3 Tax=Desulfitobacterium hafniense RepID=B8FPV2_DESHD
Uncharacterized protein {ECO:0000313|EMBL:KKR05311.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
ABC transporter-like protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=144 to=158 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
gwc2_scaffold_446_21
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(18907..20643)
-----------------
DNA (1737bp)
protein (579aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GA61_CHLAD
RND family efflux transporter MFP subunit, HlyD family secretion protein {ECO:0000313|EMBL:KKR05312.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011
RND family efflux transporter MFP subunit
coiled-coil (db=Coil db_id=coil from=161 to=189 evalue=NA)
gwc2_scaffold_446_22
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(20636..20908)
-----------------
DNA (273bp)
protein (91aa)
Transcriptional regulator, MarR family n=4 Tax=Thermoanaerobacter RepID=B0K976_THEP3
MarR family transcriptional regulator {ECO:0000313|EMBL:KKR05313.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
MarR family transcriptional regulator
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=14 to=48 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site)
gwc2_scaffold_446_23
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(21408..21845)
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=Q972E1_SULTO
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KKR05314.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
isoprenylcysteine carboxyl methyltransferase
seg (db=Seg db_id=seg from=38 to=54)
gwc2_scaffold_446_24
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(21855..22598)
-----------------
DNA (744bp)
protein (248aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVF4_9BACT rbh
Zinc/iron permease {ECO:0000313|EMBL:KKR05315.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
seg (db=Seg db_id=seg from=170 to=189)
gwc2_scaffold_446_25
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(22661..23416)
-----------------
DNA (756bp)
protein (252aa)
Transcriptional regulator, TrmB n=1 Tax=sediment metagenome RepID=D9PL89_9ZZZZ
Transcriptional regulator TrmB {ECO:0000313|EMBL:KKR05316.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
Transcriptional regulator, TrmB
seg (db=Seg db_id=seg from=87 to=98)
gwc2_scaffold_446_26
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

23586..23996
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05317.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
gwc2_scaffold_446_27
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

24019..25677
-----------------
DNA (1659bp)
protein (553aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05318.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_446_28
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(25685..26164)
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BH93_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKR05319.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
gwc2_scaffold_446_29
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(26238..26993)
-----------------
DNA (756bp)
protein (252aa)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Caloramator australicus RC3 RepID=I7J6C5_9CLOT
16S rRNA methyltransferase {ECO:0000313|EMBL:KKR05320.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
RNA methyltransferase, RsmE family protein
(db=HMMPfam db_id=PF04452 from=21 to=248 evalue=1.3e-55 interpro_id=IPR006700 interpro_description=Ribosomal RNA small subunit methyltransferase E GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
gwc2_scaffold_446_30
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

27085..27651
-----------------
DNA (567bp)
protein (189aa)
Alkyl hydroperoxide reductase, peroxiredoxin (Alkyl hydroperoxide reductase subunit C) {ECO:0000313|EMBL:KKR05321.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KKR05321.1};; TaxID=1619062 species="Bacteria; Pere
Alkyl hydroperoxide reductase subunit c n=3 Tax=Thermococcaceae RepID=Q8U2V6_PYRFU
alkyl hydroperoxide reductase
Thioredoxin-like (db=superfamily db_id=SSF52833 from=1 to=187 evalue=1.3e-63 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
Displaying items 1-30 of 202 in total

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