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gwc2_scaffold_5644

Alias: PER_GWC2_39_17_15

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc2_scaffold_5644_1
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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2..442
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04552.1}; Flags: Fragment;; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwc2_scaffold_5644_2
zPERA2_38_36, Peregrinibacteria, Bacteria

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comp(596..847)
-----------------
DNA (252bp)
protein (84aa)
Tax=zPERA2_38_36
gwc2_scaffold_5644_3
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(857..1288)
-----------------
DNA (432bp)
protein (144aa)
Threonyl/alanyl tRNA synthetase SAD n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DKA8_DESVM
Alanyl-tRNA synthetase {ECO:0000313|EMBL:KKR04554.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
threonyl/alanyl tRNA synthetase SAD
no description (db=HMMSmart db_id=SM00863 from=96 to=139 evalue=0.00034 interpro_id=IPR012947 interpro_description=Threonyl/alanyl tRNA synthetase, SAD GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Molecular Function: ligase activity, forming aminoacyl-tRNA and related compounds (GO:0016876), Biological Process: tRNA aminoacylation (GO:0043039))
gwc2_scaffold_5644_4
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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1405..2004
-----------------
DNA (600bp)
protein (200aa)
Tetratricopeptide TPR_2 n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YZZ1_9RICK
Uncharacterized protein {ECO:0000313|EMBL:KKR04555.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
TPR repeat
coiled-coil (db=Coil db_id=coil from=178 to=199 evalue=NA)
gwc2_scaffold_5644_5
zPERA2_38_36, Peregrinibacteria, Bacteria

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2554..3957
-----------------
DNA (1404bp)
protein (468aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E143_DICTD
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwc2_scaffold_5644_6
zPERA2_38_36, Peregrinibacteria, Bacteria

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3989..6586
-----------------
DNA (2598bp)
protein (866aa)
Protein translocase subunit SecA n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LX21_TEPAE rbh
Protein translocase subunit SecA Tax=zPERA2_38_36
protein translocase subunit secA
secA: preprotein translocase, SecA subunit (db=HMMTigr db_id=TIGR00963 from=28 to=785 evalue=0.0 interpro_id=IPR000185 interpro_description=SecA protein GO=Molecular Function: ATP binding (GO:0005524), Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886))
gwc2_scaffold_5644_7
zPERA2_38_36, Peregrinibacteria, Bacteria

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comp(6583..7749)
-----------------
DNA (1167bp)
protein (389aa)
Permease of the major facilitator superfamily n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QCY6_DESAH
Permease of the major facilitator superfamily Tax=zPERA2_38_36
major facilitator superfamily permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=30)
gwc2_scaffold_5644_8
zPERA2_38_36, Peregrinibacteria, Bacteria

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comp(8171..8857)
-----------------
DNA (687bp)
protein (229aa)
Glycosyl transferase family 2 n=2 Tax=Rahnella RepID=E8XRF8_RAHSY
Family 2 glycosyl transferase Tax=zPERA2_38_36
family 2 glycosyl transferase
seg (db=Seg db_id=seg from=82 to=98)
gwc2_scaffold_5644_9
zPERA2_38_36, Peregrinibacteria, Bacteria

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comp(8854..9432)
-----------------
DNA (579bp)
protein (193aa)
Putative DedA family, membrane protein n=1 Tax=Pelagibaca bermudensis HTCC2601 RepID=Q0FPG2_9RHOB
Uncharacterized protein Tax=zPERA2_38_36
dedA family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
gwc2_scaffold_5644_10
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(9450..10448)
-----------------
DNA (999bp)
protein (333aa)
UDP-glucose 4-epimerase, UDP-glucose 4-epimerase {ECO:0000313|EMBL:KKR04561.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KKR04561.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacter
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1K5_DESTD rbh
galE: UDP-glucose 4-epimerase (db=HMMTigr db_id=TIGR01179 from=3 to=331 evalue=1.3e-146 interpro_id=IPR005886 interpro_description=UDP-glucose 4-epimerase GO=Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978), Biological Process: galactose metabolic process (GO:0006012))
gwc2_scaffold_5644_11
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(10513..12792)
-----------------
DNA (2280bp)
protein (760aa)
DNA segregation ATPase FtsK/SpoIIIE and related proteins n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2R0_PELTS rbh
Cell division protein FtsK {ECO:0000313|EMBL:KKR04562.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins
coiled-coil (db=Coil db_id=coil from=292 to=313 evalue=NA)
gwc2_scaffold_5644_12
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(12868..13611)
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04563.1}; Flags: Fragment;; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
Displaying 12 items

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