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This organism can only be binned in the context of its binning project GWF1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwa2_scaffold_9830

Alias: GWA2_UNK_32172a

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_9830_1
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3..917
-----------------
DNA (915bp)
protein (305aa)
Protein translocase subunit SecA Tax=GWA2_OD1_40_9
hypothetical protein
Protein translocase subunit SecA
gwa2_scaffold_9830_2
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

935..2191
-----------------
DNA (1257bp)
protein (419aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=GWA2_OD1_40_9
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelateligase
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
gwa2_scaffold_9830_3
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2201..3571
-----------------
DNA (1371bp)
protein (457aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=GWA2_OD1_40_9
UDP-N-acetylmuramoylalanine--D-glutamate ligase
gwa2_scaffold_9830_4
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3573..4124
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein Tax=GWA2_OD1_40_9
hypothetical protein
Laccase domain protein aq_167
gwa2_scaffold_9830_5
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4126..5430
-----------------
DNA (1305bp)
protein (435aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase Tax=GWA2_OD1_40_9
UDP-N-acetylmuramate--L-alanine ligase
gwa2_scaffold_9830_6
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5537..6241
-----------------
DNA (705bp)
protein (235aa)
hypothetical protein Tax=GWA2_OD1_40_9
gwa2_scaffold_9830_7
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6189..7376)
-----------------
DNA (1188bp)
protein (396aa)
Uncharacterized protein Tax=GWA2_OD1_40_9
conserved protein of unknown function
Uncharacterized protein
gwa2_scaffold_9830_8
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(7546..8625)
-----------------
DNA (1080bp)
protein (360aa)
RNA binding S1 domain protein Tax=GWA2_OD1_40_9
30S ribosomal protein S1
RNA binding S1 domain protein
gwa2_scaffold_9830_9
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8757..9407
-----------------
DNA (651bp)
protein (217aa)
Zn-dependent hydrolase of the metallo-beta-lactamase superfamily Tax=GWA2_OD1_40_9
Zn-dependent hydrolase of the metallo-beta-lactamase superfamily
gwa2_scaffold_9830_10
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9441..9659
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR79366.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
gwa2_scaffold_9830_11
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


9643..11100
-----------------
DNA (1458bp)
protein (486aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A Tax=GWA2_OD1_40_9
DNA gyrase subunit A
gwa2_scaffold_9830_12
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11087..12172
-----------------
DNA (1086bp)
protein (362aa)
DNA gyrase subunit A Tax=GWA2_OD1_40_9
DNA gyrase subunit A
Suspect SCG annotation. See neighboring gene [gwa2_scaffold_9830_11].
DNA gyrase subunit A
gwa2_scaffold_9830_13
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12356..12610
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein Tax=GWA2_OD1_40_9
gwa2_scaffold_9830_14
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12600..13220)
-----------------
DNA (621bp)
protein (207aa)
Transposase IS200-family protein Tax=GWA2_OD1_40_9
transposase
Transposase IS200-family protein
gwa2_scaffold_9830_15
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13327..13857
-----------------
DNA (531bp)
protein (177aa)
Methyltransferase type 11 Tax=GWA2_OD1_40_9
type 11 methyltransferase
Methyltransferase type 11
gwa2_scaffold_9830_16
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13894..15201
-----------------
DNA (1308bp)
protein (436aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR79372.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
family 1 extracellular solute-binding protein
Displaying 16 items

View Taxonomy