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This organism can only be binned in the context of its binning project GWB1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwa2_scaffold_4852

Alias: GWA2_CP_megabin_Ab397_201

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_4852_1
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(169..456)
-----------------
DNA (288bp)
protein (96aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_26
Putative uncharacterized protein
gwa2_scaffold_4852_2
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(546..2045)
-----------------
DNA (1500bp)
protein (500aa)
Conserved hypothetical secreted protein Tax=GWA2_OD1_47_26
Conserved hypothetical secreted protein
gwa2_scaffold_4852_3
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(2092..3369)
-----------------
DNA (1278bp)
protein (426aa)
Peptidase M16 domain protein Tax=GWA2_OD1_47_26
peptidase M16 domain-containing protein
Peptidase M16 domain protein
gwa2_scaffold_4852_4
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(3452..4201)
-----------------
DNA (750bp)
protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU73044.1}; TaxID=1618844 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_26.;"
ErfK/YbiS/YcfS/YnhG family protein
Putative uncharacterized protein
gwa2_scaffold_4852_5
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(4207..4896)
-----------------
DNA (690bp)
protein (230aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_26
HAD-superfamily subfamily IB hydrolase, TIGR01490
Putative uncharacterized protein
gwa2_scaffold_4852_6
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

4995..5867
-----------------
DNA (873bp)
protein (291aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase Tax=GWA2_OD1_47_26
Thymidylate synthase
gwa2_scaffold_4852_7
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

comp(5870..6943)
-----------------
DNA (1074bp)
protein (358aa)
RNA-directed DNA polymerase {ECO:0000313|EMBL:KKU12168.1}; Flags: Fragment;; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
RNA-directed DNA polymerase
RNA-directed DNA polymerase
gwa2_scaffold_4852_8
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

7235..7453
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein Tax=GWA2_OD1_47_26
gwa2_scaffold_4852_9
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

7923..8414
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein Tax=GWA2_OD1_47_26
gwa2_scaffold_4852_10
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

8830..9357
-----------------
DNA (528bp)
protein (176aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000313|EMBL:KKU73050.1}; TaxID=1618844 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_26.;"
Dihydrofolate reductase
gwa2_scaffold_4852_11
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

9423..10133
-----------------
DNA (711bp)
protein (237aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase Tax=GWA2_OD1_47_26
Thymidylate kinase
gwa2_scaffold_4852_12
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

10130..10837
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein SechA1_16918 Tax=GWA2_OD1_47_26
membrane protein
hypothetical protein SechA1_16918
gwa2_scaffold_4852_13
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

10991..12619
-----------------
DNA (1629bp)
protein (543aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
aspartyl/glutamyl-tRNA amidotransferase subunit B Tax=GWA2_OD1_47_26
aspartyl/glutamyl-tRNA amidotransferase subunit B
gwa2_scaffold_4852_14
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(12772..14670)
-----------------
DNA (1899bp)
protein (633aa)
Uncharacterized conserved protein Tax=GWA2_OD1_47_26
regulator of chromosome condensation
Uncharacterized conserved protein
gwa2_scaffold_4852_15
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(14683..15318)
-----------------
DNA (636bp)
protein (212aa)
hypothetical protein Tax=GWA2_OD1_47_26
gwa2_scaffold_4852_16
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(15434..17356)
-----------------
DNA (1923bp)
protein (641aa)
Two-component sensor kinase Tax=GWA2_OD1_47_26
two component system sensor histidine kinase
Two-component sensor kinase
gwa2_scaffold_4852_17
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(17438..18487)
-----------------
DNA (1050bp)
protein (350aa)
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII Tax=GWA2_OD1_47_26
beta-ketoacyl-acyl carrier protein synthase
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII
gwa2_scaffold_4852_18
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(18784..19383)
-----------------
DNA (600bp)
protein (200aa)
Repressor in the phenylacetic acid catabolism Tax=GWA2_OD1_47_26
PaaX family transcriptional regulator
Repressor in the phenylacetic acid catabolism
gwa2_scaffold_4852_19
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

19660..20556
-----------------
DNA (897bp)
protein (299aa)
hypothetical protein Tax=GWA2_OD1_47_26
hypothetical protein
Alr4504 protein
gwa2_scaffold_4852_20
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(20568..20885)
-----------------
DNA (318bp)
protein (106aa)
hypothetical protein Tax=GWA2_OD1_47_26
gwa2_scaffold_4852_21
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(20897..21343)
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein Tax=GWA2_OD1_47_26
gwa2_scaffold_4852_22
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(21285..21548)
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein Tax=GWA2_OD1_47_26
gwa2_scaffold_4852_23
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(21729..22169)
-----------------
DNA (441bp)
protein (147aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_26
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_4852_24
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(22153..22572)
-----------------
DNA (420bp)
protein (140aa)
Predicted nucleotidyltransferases Tax=GWA2_OD1_47_26
nucleotidyltransferase
Predicted nucleotidyltransferases
gwa2_scaffold_4852_25
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(22665..23879)
-----------------
DNA (1215bp)
protein (405aa)
Kelch repeat-containing protein Tax=GWA2_OD1_47_26
hypothetical protein
Kelch repeat-containing protein
gwa2_scaffold_4852_26
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(23905..25266)
-----------------
DNA (1362bp)
protein (454aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_26
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_4852_27
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists


comp(25335..27302)
-----------------
DNA (1968bp)
protein (656aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
arginyl-tRNA synthetase Tax=GWA2_OD1_47_26
arginyl-tRNA synthetase
gwa2_scaffold_4852_28
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(27283..28479)
-----------------
DNA (1197bp)
protein (399aa)
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase Tax=GWA2_OD1_47_26
Tyrosine--tRNA ligase
gwa2_scaffold_4852_29
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists


comp(28584..31013)
-----------------
DNA (2430bp)
protein (810aa)
Valyl-tRNA synthetase, class Ia (EC:6.1.1.9)
Valine-tRNA ligase {ECO:0000313|EMBL:KKU73069.1}; TaxID=1618844 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_26.;"
Valine--tRNA ligase
gwa2_scaffold_4852_30
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(31126..31461)
-----------------
DNA (336bp)
protein (112aa)
hypothetical protein Tax=GWA2_OD1_47_26
Displaying items 1-30 of 41 in total

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