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gwc2_scaffold_54

Alias: GWC2_PER_33_13_1

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_PER_33_13_1_1
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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175..582
-----------------
DNA (408bp)
protein (136aa)
id=5090444 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
GWC2_PER_33_13_1_2
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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653..2698
-----------------
DNA (2046bp)
protein (682aa)
recG; ATP-dependent DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
ATP-dependent DNA helicase n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BIL8_DEHSV rbh
recG; ATP-dependent DNA helicase
seg (db=Seg db_id=seg from=294 to=304)
GWC2_PER_33_13_1_3
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(3223..6537)
-----------------
DNA (3315bp)
protein (1105aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
coiled-coil (db=Coil db_id=coil from=538 to=559 evalue=NA)
seg (db=Seg db_id=seg from=221 to=235)
transmembrane_regions (db=TMHMM db_id=tmhmm from=216 to=238)
GWC2_PER_33_13_1_4
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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6657..7391
-----------------
DNA (735bp)
protein (245aa)
Putative methyltransferase KIAA1456 like protein (Fragment) n=1 Tax=Nosema bombycis CQ1 RepID=R0M7R1_NOSBO
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase
seg (db=Seg db_id=seg from=41 to=51)
GWC2_PER_33_13_1_5
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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7410..8222
-----------------
DNA (813bp)
protein (271aa)
polysaccharide pyruvyl transferase csab (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
polysaccharide pyruvyl transferase csab (EC:2.4.1.187)
Polysaccharide pyruvyl transferase CsaB n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4QDL4_CALH1
seg (db=Seg db_id=seg from=97 to=112)
GWC2_PER_33_13_1_6
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(8229..8483)
-----------------
DNA (255bp)
protein (85aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=8 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
GWC2_PER_33_13_1_7
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(8517..9950)
-----------------
DNA (1434bp)
protein (478aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D126_HALOH rbh
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000313|EMBL:KKP37626.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=355 to=368)
GWC2_PER_33_13_1_8
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(10044..10628)
-----------------
DNA (585bp)
protein (195aa)
methylglyoxal synthase; K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Dephospho-CoA kinase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SN88_9FIRM
methylglyoxal synthase
seg (db=Seg db_id=seg from=8 to=20)
GWC2_PER_33_13_1_9
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(10625..11029)
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein cdivTM_00360 n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001742C78
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
seg (db=Seg db_id=seg from=2 to=35)
GWC2_PER_33_13_1_10
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(11053..11637)
-----------------
DNA (585bp)
protein (195aa)
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
seg (db=Seg db_id=seg from=41 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
GWC2_PER_33_13_1_11
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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11771..12616
-----------------
DNA (846bp)
protein (282aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Thermincola potens (strain JR) RepID=D5X8L1_THEPJ
Signal peptidase I {ECO:0000313|EMBL:KKP37622.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=82 to=96)
GWC2_PER_33_13_1_12
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(12648..13025)
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP37621.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=12 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
GWC2_PER_33_13_1_13
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(13015..13959)
-----------------
DNA (945bp)
protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP37620.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=8 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
GWC2_PER_33_13_1_14
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(14092..15069)
-----------------
DNA (978bp)
protein (326aa)
Phosphoesterase, RecJ domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHM1_SYNFM
DHH family protein {ECO:0000313|EMBL:KKP37619.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
phosphoesterase domain-containing protein
seg (db=Seg db_id=seg from=296 to=307)
GWC2_PER_33_13_1_15
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(15158..15481)
-----------------
DNA (324bp)
protein (108aa)
Ribosome-binding factor A n=6 Tax=Geobacillus RepID=RBFA_GEOKA
Ribosome-binding factor A {ECO:0000313|EMBL:KKP37618.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
rbfA; ribosome-binding factor A
Ribosome-binding factor A, RbfA (db=superfamily db_id=SSF89919 from=4 to=98 evalue=1.5e-14 interpro_id=IPR023799 interpro_description=Ribosome-binding factor A domain)
GWC2_PER_33_13_1_16
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

15605..16546
-----------------
DNA (942bp)
protein (314aa)
Methionyl-tRNA formyltransferase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADP4_THEID
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:KKP37617.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
methionyl-tRNA formyltransferase
GART (db=PatternScan db_id=PS00373 from=136 to=159 evalue=0.0 interpro_id=IPR001555 interpro_description=Phosphoribosylglycinamide formyltransferase, active site GO=Molecular Function: methyltransferase activity (GO:0008168))
GWC2_PER_33_13_1_17
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(16556..17968)
-----------------
DNA (1413bp)
protein (471aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IGH1_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKP37616.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=76 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
GWC2_PER_33_13_1_18
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(17913..19316)
-----------------
DNA (1404bp)
protein (468aa)
MalE-type ABC sugar transport system periplasmic component n=3 Tax=Bifidobacterium longum RepID=B3DUC7_BIFLD
Extracellular solute-binding protein {ECO:0000313|EMBL:KKP37615.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
MalE-type ABC sugar transport system periplasmic component
seg (db=Seg db_id=seg from=4 to=18)
GWC2_PER_33_13_1_19
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(19323..20279)
-----------------
DNA (957bp)
protein (319aa)
Glycosyl transferase, family 2 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6B1_GEOUR
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KKP37614.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
glycosyl transferase family protein
seg (db=Seg db_id=seg from=85 to=97)
GWC2_PER_33_13_1_20
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

20400..22433
-----------------
DNA (2034bp)
protein (678aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
coiled-coil (db=Coil db_id=coil from=244 to=265 evalue=NA)
seg (db=Seg db_id=seg from=8 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
GWC2_PER_33_13_1_21
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

22443..23159
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GHD6_9FIRM
hypothetical protein
coiled-coil (db=Coil db_id=coil from=58 to=79 evalue=NA)
GWC2_PER_33_13_1_22
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

23215..23889
-----------------
DNA (675bp)
protein (225aa)
Putative zinc-dependent metalloprotease n=1 Tax=Candidatus Arthromitus sp. SFB-rat-Yit RepID=G2IGY3_9CLOT
putative zinc-dependent metalloprotease; K06973 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
putative zinc-dependent metalloprotease
seg (db=Seg db_id=seg from=132 to=146)
GWC2_PER_33_13_1_23
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

23938..24603
-----------------
DNA (666bp)
protein (222aa)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NQV0_9FIRM
Ribosomal RNA small subunit methyltransferase G {ECO:0000313|EMBL:KKP37610.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
methyltransferase GidB
(db=HMMPfam db_id=PF02527 from=19 to=179 evalue=1.8e-41 interpro_id=IPR003682 interpro_description=rRNA small subunit methyltransferase G GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: rRNA methyltransferase activity (GO:0008649))
GWC2_PER_33_13_1_24
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

24835..25431
-----------------
DNA (597bp)
protein (199aa)
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X285_BACMS
Ribosomal RNA large subunit methyltransferase E {ECO:0000313|EMBL:KKP37609.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
rrmJ; 23S rRNA methyltransferase
23S ribosomal RNA methyltransferase (db=HMMPIR db_id=PIRSF005461 from=1 to=197 evalue=1.5e-63 interpro_id=IPR015507 interpro_description=Ribosomal RNA large subunit methyltransferase E GO=Biological Process: RNA methylation (GO:0001510), Molecular Function: methyltransferase activity (GO:0008168))
GWC2_PER_33_13_1_25
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(25441..26349)
-----------------
DNA (909bp)
protein (303aa)
hypothetical protein FbacHQ_11328 n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248E978
Uncharacterized protein {ECO:0000313|EMBL:KKP37608.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
seg (db=Seg db_id=seg from=2 to=15)
GWC2_PER_33_13_1_26
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

26519..27583
-----------------
DNA (1065bp)
protein (355aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=4 Tax=unclassified Eubacteriaceae RepID=G9X0W6_9FIRM rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000313|EMBL:KKP37607.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
S-adenosylmethionine tRNA ribosyltransferase
seg (db=Seg db_id=seg from=240 to=251)
GWC2_PER_33_13_1_27
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

Not on your lists

comp(27576..29939)
-----------------
DNA (2364bp)
protein (788aa)
Alpha-L-glutamate ligase family protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KD86_9GAMM
Alpha-l-glutamate ligase-like protein {ECO:0000313|EMBL:KKP41180.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
hypothetical protein
seg (db=Seg db_id=seg from=80 to=91)
GWC2_PER_33_13_1_28
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(29997..31559)
-----------------
DNA (1563bp)
protein (521aa)
Transglutaminase-like protein n=4 Tax=Leptospira RepID=K5C6I8_LEPME
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
seg (db=Seg db_id=seg from=367 to=392)
GWC2_PER_33_13_1_29
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(31569..32456)
-----------------
DNA (888bp)
protein (296aa)
ilvE; Branched-chain-amino-acid aminotransferase (EC:2.6.1.42)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EPY7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP37604.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
no description (db=Gene3D db_id=G3DSA:3.30.470.10 from=5 to=125 evalue=1.9e-27)
GWC2_PER_33_13_1_30
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(32538..33191)
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUY9_FLAIG
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
seg (db=Seg db_id=seg from=5 to=21)
Displaying items 1-30 of 152 in total

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