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gwc2_scaffold_90

Alias: GWC2_PER_33_13_3

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_PER_33_13_3_1
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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237..578
-----------------
DNA (342bp)
protein (114aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=49 to=67)
(db=HMMPfam db_id=PF05973 from=15 to=108 evalue=9.9e-08 interpro_id=IPR009241 interpro_description=Addiction module killer protein)
GWC2_PER_33_13_3_2
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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581..1024
-----------------
DNA (444bp)
protein (148aa)
Lambda repressor-like, DNA-binding Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=2 to=22)
(db=HMMPfam db_id=PF01381 from=35 to=87 evalue=1.2e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00530 from=34 to=88 evalue=1.3e-11 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
GWC2_PER_33_13_3_3
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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993..1274
-----------------
DNA (282bp)
protein (94aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
coiled-coil (db=Coil db_id=coil from=72 to=93 evalue=NA)
seg (db=Seg db_id=seg from=63 to=77)
GWC2_PER_33_13_3_4
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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1490..2845
-----------------
DNA (1356bp)
protein (452aa)
aspartate kinase III; K00928 aspartate kinase [EC:2.7.2.4] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Aspartokinase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZB7_CHLT3 rbh
aspartate kinase III
coiled-coil (db=Coil db_id=coil from=53 to=74 evalue=NA)
GWC2_PER_33_13_3_5
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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2864..3610
-----------------
DNA (747bp)
protein (249aa)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VFD6_CLOAI
Dihydrodipicolinate reductase {ECO:0000313|EMBL:KKP37357.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
dihydrodipicolinate reductase
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (db=superfamily db_id=SSF55347 from=109 to=216 evalue=1.5e-25)
GWC2_PER_33_13_3_6
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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3641..4525
-----------------
DNA (885bp)
protein (295aa)
Dihydrodipicolinate synthase, dihydrodipicolinate synthase {ECO:0000313|EMBL:KKP40834.1}; EC=4.3.3.7 {ECO:0000313|EMBL:KKP40834.1};; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Pereg
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Spirochaeta thermophila RepID=E0RS29_SPITD
Dihydrodipicolinate synthase
seg (db=Seg db_id=seg from=256 to=271)
GWC2_PER_33_13_3_7
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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4531..5802
-----------------
DNA (1272bp)
protein (424aa)
Diaminopimelate decarboxylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G338_SORC5 rbh
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
seg (db=Seg db_id=seg from=2 to=15)
GWC2_PER_33_13_3_8
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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5799..6965
-----------------
DNA (1167bp)
protein (389aa)
Similar to N-succinyldiaminopimelate aminotransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3U7_9BACT rbh
N-succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:KKP37354.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
aminotransferase
AA_TRANSFER_CLASS_1 (db=PatternScan db_id=PS00105 from=231 to=244 evalue=0.0 interpro_id=IPR004838 interpro_description=Aminotransferases, class-I, pyridoxal-phosphate-binding site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058), Molecular Function: pyridoxal phosphate binding (GO:0030170))
GWC2_PER_33_13_3_9
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(6966..8090)
-----------------
DNA (1125bp)
protein (375aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=363 to=374)
GWC2_PER_33_13_3_10
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(8148..9464)
-----------------
DNA (1317bp)
protein (439aa)
Homoserine dehydrogenase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O67677_AQUAE
Homoserine dehydrogenase {ECO:0000313|EMBL:KKP37352.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
thrA; homoserine dehydrogenase
no description (db=Gene3D db_id=G3DSA:3.30.360.10 from=150 to=294 evalue=3.9e-30)
GWC2_PER_33_13_3_11
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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9734..10951
-----------------
DNA (1218bp)
protein (406aa)
Guanine deaminase, guanine deaminase {ECO:0000313|EMBL:KKP40839.1}; EC=3.5.4.3 {ECO:0000313|EMBL:KKP40839.1};; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium
guaD; guanine deaminase (EC:3.5.4.3)
Guanine deaminase n=829 Tax=Enterobacteriaceae RepID=GUAD_ECOLI
coiled-coil (db=Coil db_id=coil from=157 to=178 evalue=NA)
GWC2_PER_33_13_3_12
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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11250..11789
-----------------
DNA (540bp)
protein (180aa)
S-layer family protein domain protein n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DXG5_9BACL
polysaccharide deacetylase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
polysaccharide deacetylase
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
GWC2_PER_33_13_3_13
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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12005..12982
-----------------
DNA (978bp)
protein (326aa)
cbs; cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
cystathionine beta-synthase n=1 Tax=Diplorickettsia massiliensis 20B RepID=UPI00029A7ED9 rbh
cbs; cystathionine beta-synthase
seg (db=Seg db_id=seg from=75 to=90)
GWC2_PER_33_13_3_14
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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13003..14157
-----------------
DNA (1155bp)
protein (385aa)
Cystathionine beta-lyase n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0R9_PARAV rbh
Cystathionine beta-lyase {ECO:0000313|EMBL:KKP37348.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
metC; cystathionine beta-lyase
no description (db=Gene3D db_id=G3DSA:3.40.640.10 from=1 to=245 evalue=1.7e-84 interpro_id=IPR015421 interpro_description=Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: pyridoxal phosphate binding (GO:0030170))
GWC2_PER_33_13_3_15
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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14422..14619
-----------------
DNA (198bp)
protein (66aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H539_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP40843.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
GWC2_PER_33_13_3_16
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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14622..15521
-----------------
DNA (900bp)
protein (300aa)
Putative cation efflux family protein n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VJV2_CLOAI
cation diffusion facilitator family transporter Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
cation diffusion facilitator family transporter
seg (db=Seg db_id=seg from=122 to=146)
GWC2_PER_33_13_3_17
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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15573..15995
-----------------
DNA (423bp)
protein (141aa)
Ferritin Dps family protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCN0_GALCS
ferritin Dps family protein; K03594 bacterioferritin Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
ferritin Dps family protein
no description (db=Gene3D db_id=G3DSA:1.20.1260.10 from=1 to=138 evalue=1.0e-29 interpro_id=IPR012347 interpro_description=Ferritin-related)
GWC2_PER_33_13_3_18
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(16071..17357)
-----------------
DNA (1287bp)
protein (429aa)
CBS domain-containing protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVY8_SOLCM rbh
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
coiled-coil (db=Coil db_id=coil from=216 to=237 evalue=NA)
GWC2_PER_33_13_3_19
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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comp(17482..19122)
-----------------
DNA (1641bp)
protein (547aa)
Putative uncharacterized protein n=2 Tax=Campylobacter fetus subsp. venerealis RepID=C5H2Z3_CAMFE
Uncharacterized protein {ECO:0000313|EMBL:KKP40847.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=232 to=253 evalue=NA)
GWC2_PER_33_13_3_20
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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comp(19131..19691)
-----------------
DNA (561bp)
protein (187aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0L3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP40848.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
hypothetical protein
seg (db=Seg db_id=seg from=113 to=120)
GWC2_PER_33_13_3_21
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(19672..19827)
-----------------
DNA (156bp)
protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP37341.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
GWC2_PER_33_13_3_22
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

Not on your lists

comp(19931..21601)
-----------------
DNA (1671bp)
protein (557aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP40850.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
coiled-coil (db=Coil db_id=coil from=243 to=264 evalue=NA)
seg (db=Seg db_id=seg from=247 to=265)
GWC2_PER_33_13_3_23
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

21768..22016
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP37339.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=68 to=80)
phd_fam: prevent-host-death family protein (db=HMMTigr db_id=TIGR01552 from=4 to=56 evalue=0.0041 interpro_id=IPR006442 interpro_description=Bacteriophage P1, prevent-host-death protein)
(db=HMMPfam db_id=PF02604 from=3 to=60 evalue=8.9e-10 interpro_id=IPR006442 interpro_description=Bacteriophage P1, prevent-host-death protein)
GWC2_PER_33_13_3_24
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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22009..22251
-----------------
DNA (243bp)
protein (81aa)
RelE-like Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
RelE-like (db=superfamily db_id=SSF143011 from=2 to=74 evalue=8.9e-06)
GWC2_PER_33_13_3_25
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(22248..23930)
-----------------
DNA (1683bp)
protein (561aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFY5_ANADF
Uncharacterized protein {ECO:0000313|EMBL:KKP37337.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
seg (db=Seg db_id=seg from=252 to=263)
GWC2_PER_33_13_3_26
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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24099..24851
-----------------
DNA (753bp)
protein (251aa)
Transcriptional regulator, TrmB n=2 Tax=Marinomonas RepID=A6W3S6_MARMS
Transcriptional regulator TrmB {ECO:0000313|EMBL:KKP40854.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
transcriptional regulator TrmB
coiled-coil (db=Coil db_id=coil from=80 to=101 evalue=NA)
GWC2_PER_33_13_3_27
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(24853..25665)
-----------------
DNA (813bp)
protein (271aa)
folP; dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
folP; Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002890477
seg (db=Seg db_id=seg from=210 to=221)
GWC2_PER_33_13_3_28
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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25782..27041
-----------------
DNA (1260bp)
protein (420aa)
FAD binding domain, putative n=1 Tax=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) RepID=B5Y9L9_COPPD
FAD binding domain Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
FAD binding domain
coiled-coil (db=Coil db_id=coil from=226 to=250 evalue=NA)
GWC2_PER_33_13_3_29
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(27028..28245)
-----------------
DNA (1218bp)
protein (406aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Burkholderia sp. (strain 383) RepID=Q394B1_BURS3
Fic family protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
fic/DOC family protein
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=8 to=64 evalue=0.00094 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
GWC2_PER_33_13_3_30
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

28344..29618
-----------------
DNA (1275bp)
protein (425aa)
pheA; chorismate mutase (EC:5.4.99.5)
methionine aminopeptidase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3778F
Methionine aminopeptidase {ECO:0000313|EMBL:KKP37332.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=219 to=237)
Displaying items 1-30 of 124 in total

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