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gwc2_scaffold_1057

Alias: GWC2_PER_33_13_14

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_PER_33_13_14_1
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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491..1771
-----------------
DNA (1281bp)
protein (427aa)
Uncharacterized protein n=1 Tax=Caloramator australicus RC3 RepID=I7K868_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKP36896.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
seg (db=Seg db_id=seg from=15 to=28)
GWC2_PER_33_13_14_2
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(1783..3483)
-----------------
DNA (1701bp)
protein (567aa)
hymC1; [Fe] hydrogenase subunit HymC; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Hydrogenase, Fe-only n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J7T4_MARPK rbh
hymC1; [Fe] hydrogenase subunit HymC
seg (db=Seg db_id=seg from=403 to=415)
GWC2_PER_33_13_14_3
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(3595..4593)
-----------------
DNA (999bp)
protein (333aa)
respiratory-chain NADH dehydrogenase domain 51 kDa subunit; K00436 hydrogen dehydrogenase [EC:1.12.1.2] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H8L9_ILYPC
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
COMPLEX1_51K_2 (db=PatternScan db_id=PS00645 from=268 to=279 evalue=0.0 interpro_id=IPR001949 interpro_description=NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: FMN binding (GO:0010181), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
GWC2_PER_33_13_14_4
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(4593..5102)
-----------------
DNA (510bp)
protein (170aa)
[Fe] hydrogenase, HymD subunit n=7 Tax=Dehalococcoides mccartyi RepID=D2BG79_DEHSV
[Fe] hydrogenase, HymD subunit {ECO:0000313|EMBL:KKP36899.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
(Fe) hydrogenase subunit HymD
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
GWC2_PER_33_13_14_5
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(5188..6324)
-----------------
DNA (1137bp)
protein (379aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A7Z3_THEID
Major facilitator superfamily {ECO:0000313|EMBL:KKP36900.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
major facilitator superfamily protein
seg (db=Seg db_id=seg from=79 to=99)
GWC2_PER_33_13_14_6
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(6364..8325)
-----------------
DNA (1962bp)
protein (654aa)
Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
Cellulosome-anchoring protein {ECO:0000313|EMBL:KKP36901.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=46 to=75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
GWC2_PER_33_13_14_7
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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8369..9571
-----------------
DNA (1203bp)
protein (401aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36902.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
GWC2_PER_33_13_14_8
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(9573..10310)
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36903.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
coiled-coil (db=Coil db_id=coil from=77 to=98 evalue=NA)
(db=HMMPfam db_id=PF01978 from=11 to=65 evalue=1.5e-07 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
(db=HMMPfam db_id=PF04356 from=51 to=128 evalue=2.5e-05 interpro_id=IPR007451 interpro_description=Uncharacterised protein family UPF0274)
GWC2_PER_33_13_14_9
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(10314..10856)
-----------------
DNA (543bp)
protein (181aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
(P)ppGpp synthetase, RelA/SpoT family n=8 Tax=Saccharomonospora RepID=C7MR02_SACVD
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:KKP36904.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=167 to=179)
GWC2_PER_33_13_14_10
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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11106..11303
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36905.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=12 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
GWC2_PER_33_13_14_11
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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11384..11749
-----------------
DNA (366bp)
protein (122aa)
EamA-like transporter family n=2 Tax=Sulfurospirillum RepID=I3XUM6_SULBS
EamA-like protein transporter family {ECO:0000313|EMBL:KKP36906.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
seg (db=Seg db_id=seg from=80 to=97)
GWC2_PER_33_13_14_12
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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11764..12693
-----------------
DNA (930bp)
protein (310aa)
B-glycosyltransferase, glycosyltransferase family 2 protein, dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KKP38874.1}; EC=2.4.1.83 {ECO:0000313|EMBL:KKP38874.1};; TaxID=1619061 species="Ba
Glycosyl transferase n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LP23_9CHRO
glycosyltransferase
seg (db=Seg db_id=seg from=229 to=249)
GWC2_PER_33_13_14_13
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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12686..13078
-----------------
DNA (393bp)
protein (131aa)
Methylmalonyl-CoA epimerase n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E7B7_FLESM
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KKP36908.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
methylmalonyl-CoA epimerase
GLYOXALASE FAMILY PROTEIN (db=HMMPanther db_id=PTHR21366 from=45 to=79 evalue=1.6e-08)
GWC2_PER_33_13_14_14
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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13143..14390
-----------------
DNA (1248bp)
protein (416aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0AAK7_CALLD
aspartate/tyrosine/aromatic aminotransferase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
aspartate/tyrosine/aromatic aminotransferase
coiled-coil (db=Coil db_id=coil from=395 to=416 evalue=NA)
GWC2_PER_33_13_14_15
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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14395..14631
-----------------
DNA (237bp)
protein (79aa)
Acyl carrier protein n=6 Tax=Bacteroides fragilis RepID=Q64Y50_BACFR
Acyl carrier protein {ECO:0000313|EMBL:KKP38877.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
acyl carrier protein
no description (db=Gene3D db_id=G3DSA:1.10.1200.10 from=1 to=73 evalue=1.2e-10 interpro_id=IPR009081 interpro_description=Acyl carrier protein-like GO=Molecular Function: acyl carrier activity (GO:0000036))
GWC2_PER_33_13_14_16
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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14729..16321
-----------------
DNA (1593bp)
protein (531aa)
long-chain-fatty-acid--CoA ligase, putative, partial n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A342A rbh
AMP-binding domain protein {ECO:0000313|EMBL:KKP36911.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
AMP-binding enzyme family protein
seg (db=Seg db_id=seg from=269 to=277)
GWC2_PER_33_13_14_17
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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16374..16598
-----------------
DNA (225bp)
protein (75aa)
Acyl carrier protein n=1 Tax=Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014) RepID=E4TA08_RIEAD
Acyl carrier protein, acyl carrier protein {ECO:0000313|EMBL:KKP38879.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
acyl carrier protein
no description (db=Gene3D db_id=G3DSA:1.10.1200.10 from=1 to=72 evalue=2.6e-10 interpro_id=IPR009081 interpro_description=Acyl carrier protein-like GO=Molecular Function: acyl carrier activity (GO:0000036))
GWC2_PER_33_13_14_18
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(16698..19349)
-----------------
DNA (2652bp)
protein (884aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=7 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
GWC2_PER_33_13_14_19
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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19479..20225
-----------------
DNA (747bp)
protein (249aa)
3-ketoacyl-ACP reductase (EC:1.1.1.100) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Francisella noatunensis subsp. orientalis (strain Toba 04) RepID=I2AYQ0_FRANT
seg (db=Seg db_id=seg from=5 to=18)
GWC2_PER_33_13_14_20
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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20232..20576
-----------------
DNA (345bp)
protein (115aa)
Holo-[acyl-carrier-protein] synthase n=1 Tax=planctomycete KSU-1 RepID=I3IN84_9PLAN
Holo-[acyl-carrier-protein] synthase {ECO:0000313|EMBL:KKP36915.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
phosphopantethiene-protein transferase domain-contain protein
seg (db=Seg db_id=seg from=14 to=26)
GWC2_PER_33_13_14_21
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

20589..21260
-----------------
DNA (672bp)
protein (224aa)
Transferase, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBW7_9PLAN
acyltransferase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
acyltransferase
NEUD PROTEIN (db=HMMPanther db_id=PTHR23416:SF7 from=108 to=214 evalue=1.3e-13)
GWC2_PER_33_13_14_22
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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21269..22198
-----------------
DNA (930bp)
protein (310aa)
Putative uncharacterized protein n=1 Tax=Francisella sp. (strain TX077308) RepID=F8GBM2_FRAST
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
uncharacterized protein precursor
Arabinanase/levansucrase/invertase (db=superfamily db_id=SSF75005 from=64 to=300 evalue=1.4e-33 interpro_id=IPR023296 interpro_description=Glycosyl hydrolase family 43, five-bladed beta-propellor domain)
GWC2_PER_33_13_14_23
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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22319..22936
-----------------
DNA (618bp)
protein (206aa)
SAM-binding motif-containing protein n=1 Tax=Alishewanella agri BL06 RepID=I9P5Z0_9ALTE
type 12 methyltransferase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
SAM-binding motif-containing protein
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=46 to=99 evalue=0.00071)
GWC2_PER_33_13_14_24
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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22948..23643
-----------------
DNA (696bp)
protein (232aa)
Conserved uncharacterized protein, WbqC-like n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NRV0_DESTT
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
(db=HMMPfam db_id=PF08889 from=8 to=229 evalue=4.4e-73 interpro_id=IPR014985 interpro_description=WbqC-like protein family)
GWC2_PER_33_13_14_25
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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23712..24791
-----------------
DNA (1080bp)
protein (360aa)
dTDP-D-glucose 4,6-dehydratase (EC:4.2.1.46)
NAD-dependent epimerase/dehydratase n=2 Tax=Sulfurospirillum RepID=D1B564_SULD5 rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KKP36920.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
DTDP-GLUCOSE 4,6-DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF41 from=23 to=339 evalue=1.7e-133 interpro_id=IPR005888 interpro_description=dTDP-glucose 4,6-dehydratase GO=Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460), Biological Process: nucleotide-sugar metabolic process (GO:0009225))
GWC2_PER_33_13_14_26
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

24810..25946
-----------------
DNA (1137bp)
protein (379aa)
ArnB2: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NBI8_DESTT rbh
ArnB2: UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase {ECO:0000313|EMBL:KKP36921.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA
arnB2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB2
seg (db=Seg db_id=seg from=112 to=124)
GWC2_PER_33_13_14_27
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

25937..27721
-----------------
DNA (1785bp)
protein (595aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=114 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
GWC2_PER_33_13_14_28
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(27716..28858)
-----------------
DNA (1143bp)
protein (381aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=262 to=278)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
GWC2_PER_33_13_14_29
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

28919..30580
-----------------
DNA (1662bp)
protein (554aa)
Na/Pi-cotransporter II-related protein n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E6Z4_FLESM rbh
Na/Pi-cotransporter II-related protein {ECO:0000313|EMBL:KKP36924.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
Na/Pi-cotransporter II-like protein
seg (db=Seg db_id=seg from=7 to=19)
GWC2_PER_33_13_14_30
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(30593..30946)
-----------------
DNA (354bp)
protein (118aa)
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:KKP36925.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=4 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
Cupredoxins (db=superfamily db_id=SSF49503 from=5 to=117 evalue=3.8e-10 interpro_id=IPR008972 interpro_description=Cupredoxin)
Displaying items 1-30 of 35 in total

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