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gwc2_scaffold_7344

Alias: GWC2_PER_33_13_21

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_PER_33_13_21_1
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(115..411)
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36236.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
GWC2_PER_33_13_21_2
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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comp(483..716)
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP38294.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
seg (db=Seg db_id=seg from=7 to=23)
(db=HMMPfam db_id=PF01402 from=3 to=39 evalue=0.00019 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
GWC2_PER_33_13_21_3
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(793..1056)
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36238.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
GWC2_PER_33_13_21_4
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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1387..1668
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36239.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=4 to=15)
GWC2_PER_33_13_21_5
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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1692..2510
-----------------
DNA (819bp)
protein (273aa)
PF14066 family protein n=60 Tax=cellular organisms RepID=J4K5C0_LEPIR
PF14066 family protein {ECO:0000313|EMBL:KKP36240.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=19 to=40 evalue=NA)
GWC2_PER_33_13_21_6
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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2652..2927
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36241.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
GWC2_PER_33_13_21_7
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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2929..3195
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3Y051_SULBS
Uncharacterized protein {ECO:0000313|EMBL:KKP36242.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
(db=HMMPfam db_id=PF05015 from=37 to=76 evalue=1.3e-07 interpro_id=IPR007711 interpro_description=Plasmid maintenance system killer)
GWC2_PER_33_13_21_8
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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3210..3518
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36243.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=5 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
GWC2_PER_33_13_21_9
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(3713..5404)
-----------------
DNA (1692bp)
protein (564aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36244.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=532 to=558 evalue=4.8e-06)
GWC2_PER_33_13_21_10
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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5573..6325
-----------------
DNA (753bp)
protein (251aa)
Transcriptional regulator, TrmB n=1 Tax=sediment metagenome RepID=D9PL89_9ZZZZ
transcriptional regulator TrmB Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Transcriptional regulator, TrmB
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=99 evalue=1.1e-06)
GWC2_PER_33_13_21_11
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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6400..6702
-----------------
DNA (303bp)
protein (101aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=75 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
GWC2_PER_33_13_21_12
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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6714..7172
-----------------
DNA (459bp)
protein (153aa)
Cytidyltransferase-related enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TW70_9EURY
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:KKP36247.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
FAD synthetase
seg (db=Seg db_id=seg from=106 to=120)
GWC2_PER_33_13_21_13
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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7249..8190
-----------------
DNA (942bp)
protein (314aa)
Cell division protein FtsX n=1 Tax=Caloramator australicus RC3 RepID=I7LJV8_9CLOT
Cell division protein FtsX {ECO:0000313|EMBL:KKP36248.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
ftsX; cell division protein FtsX
seg (db=Seg db_id=seg from=42 to=66)
GWC2_PER_33_13_21_14
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

8266..9006
-----------------
DNA (741bp)
protein (247aa)
DNA repair protein RecO n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RECO_ALKOO
Repair protein RecO protein {ECO:0000313|EMBL:KKP36249.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
DNA repair protein RecO
(db=HMMPfam db_id=PF02565 from=92 to=242 evalue=1.1e-10 interpro_id=IPR003717 interpro_description=Recombination protein O, RecO GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
GWC2_PER_33_13_21_15
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(9003..11198)
-----------------
DNA (2196bp)
protein (732aa)
GTP pyrophosphokinase, (P)ppGpp synthetase I n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5EG90_9FIRM
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:KKP36250.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
RelA/SpoT family protein
coiled-coil (db=Coil db_id=coil from=495 to=516 evalue=NA)
Displaying 15 items

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