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gwe2_scaffold_3941

Alias: PER_GWE2_39_6_46

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe2_scaffold_3941_1
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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comp(2..2161)
-----------------
DNA (2160bp)
protein (720aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FIE2_DESAA
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
seg (db=Seg db_id=seg from=149 to=170)
gwe2_scaffold_3941_2
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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2314..2835
-----------------
DNA (522bp)
protein (174aa)
nicotinamide-nucleotide adenylyltransferase; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=PER_GWF2_39_17
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9H4_METCZ
nicotinamide-nucleotide adenylyltransferase
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=1 to=170 evalue=1.6e-42 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
gwe2_scaffold_3941_3
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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2840..4258
-----------------
DNA (1419bp)
protein (473aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=PER_GWF2_39_17
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VGH6_CLOAI rbh
seg (db=Seg db_id=seg from=238 to=253)
gwe2_scaffold_3941_4
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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4255..4449
-----------------
DNA (195bp)
protein (65aa)
transmembrane_regions Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=6 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwe2_scaffold_3941_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(4510..5784)
-----------------
DNA (1275bp)
protein (425aa)
NusA antitermination factor n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRG2_ACEAZ rbh
NusA antitermination factor, N utilization substance protein A {ECO:0000313|EMBL:KKR09263.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_1
NusA antitermination factor
no description (db=Gene3D db_id=G3DSA:3.30.1480.10 from=1 to=135 evalue=1.9e-35 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554))
gwe2_scaffold_3941_6
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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comp(5855..6364)
-----------------
DNA (510bp)
protein (170aa)
Regulatory protein RecX n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFS4_9CHLR
regulatory protein RecX; K03565 regulatory protein Tax=PER_GWF2_39_17
recX; regulatory protein RecX
(db=HMMPfam db_id=PF02631 from=52 to=164 evalue=1.2e-21 interpro_id=IPR003783 interpro_description=Regulatory protein RecX GO=Biological Process: regulation of DNA repair (GO:0006282))
gwe2_scaffold_3941_7
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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comp(6364..6936)
-----------------
DNA (573bp)
protein (191aa)
Protein RecA n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XX78_9BACT
Protein RecA, recombination protein RecA {ECO:0000313|EMBL:KKR25382.1}; Flags: Fragment;; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
Protein RecA
seg (db=Seg db_id=seg from=99 to=109)
Displaying 7 items

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