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gwe2_scaffold_4080

Alias: PER_GWE2_39_6_50

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe2_scaffold_4080_1
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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comp(1..318)
-----------------
DNA (318bp)
protein (106aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=27)
gwe2_scaffold_4080_2
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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comp(352..672)
-----------------
DNA (321bp)
protein (107aa)
transmembrane_regions Tax=PER_GWF2_39_17
gwe2_scaffold_4080_3
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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comp(707..3193)
-----------------
DNA (2487bp)
protein (829aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR25051.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
seg (db=Seg db_id=seg from=340 to=366)
transmembrane_regions (db=TMHMM db_id=tmhmm from=329 to=351)
gwe2_scaffold_4080_4
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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3213..4601
-----------------
DNA (1389bp)
protein (463aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR25052.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
seg (db=Seg db_id=seg from=256 to=260)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
(db=HMMPfam db_id=PF09913 from=43 to=415 evalue=2.9e-16 interpro_id=IPR018674 interpro_description=Protein of unknown function DUF2142, membrane)
gwe2_scaffold_4080_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

4662..5255
-----------------
DNA (594bp)
protein (198aa)
transmembrane_regions Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=3 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=19)
gwe2_scaffold_4080_6
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(5202..6284)
-----------------
DNA (1083bp)
protein (361aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwe2_scaffold_4080_7
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(6292..6696)
-----------------
DNA (405bp)
protein (135aa)
UPI00019B01B7 related cluster n=1 Tax=unknown RepID=UPI00019B01B7
hypothetical protein; K07460 putative endonuclease Tax=PER_GWF2_39_17
hypothetical protein
seg (db=Seg db_id=seg from=2 to=11)
gwe2_scaffold_4080_8
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

6992..7516
-----------------
DNA (525bp)
protein (175aa)
Putative lipoprotein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=J2AMD9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKR25056.1}; Flags: Fragment;; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
putative lipoprotein
seg (db=Seg db_id=seg from=56 to=68)
Displaying 8 items

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