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gwe2_scaffold_4663

Alias: PER_GWE2_39_6_65

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe2_scaffold_4663_1
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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comp(3..1022)
-----------------
DNA (1020bp)
protein (340aa)
Penicillin-binding protein 2 n=2 Tax=Acinetobacter RepID=N9AVE4_9GAMM
Penicillin-binding protein 2, penicillin-binding protein 2 {ECO:0000313|EMBL:KKR24347.1}; Flags: Fragment;; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW
Cell division protein FtsI/penicillin-binding protein 2
seg (db=Seg db_id=seg from=16 to=33)
gwe2_scaffold_4663_2
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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comp(1062..2141)
-----------------
DNA (1080bp)
protein (360aa)
Rod shape-determining protein MreB n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWU9_SULAA rbh
Rod shape-determining protein MreB, rod shape-determining protein MreB {ECO:0000313|EMBL:KKR24348.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_G
rod shape-determining protein MreB
seg (db=Seg db_id=seg from=122 to=142)
gwe2_scaffold_4663_3
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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2323..4266
-----------------
DNA (1944bp)
protein (648aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IJ82_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKR24349.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
hypothetical protein
seg (db=Seg db_id=seg from=6 to=21)
gwe2_scaffold_4663_4
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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4312..4845
-----------------
DNA (534bp)
protein (178aa)
Peptide deformylase, peptide deformylase {ECO:0000313|EMBL:KKR24350.1}; EC=3.5.1.88 {ECO:0000313|EMBL:KKR24350.1};; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bact
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=DEF_THELT
seg (db=Seg db_id=seg from=22 to=36)
gwe2_scaffold_4663_5
RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated, Woesebacteria, Microgenomates, Bacteria

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4842..5714
-----------------
DNA (873bp)
protein (291aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated
Methionyl-tRNA formyltransferase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=FMT_CHLAD
methionyl-tRNA formyltransferase
GART (db=PatternScan db_id=PS00373 from=132 to=155 evalue=0.0 interpro_id=IPR001555 interpro_description=Phosphoribosylglycinamide formyltransferase, active site GO=Molecular Function: methyltransferase activity (GO:0008168))
gwe2_scaffold_4663_6
RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated, Woesebacteria, Microgenomates, Bacteria

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comp(5734..5994)
-----------------
DNA (261bp)
protein (87aa)
L28p-like Tax=RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated
L28p-like (db=superfamily db_id=SSF143800 from=1 to=72 evalue=2.2e-12)
(db=HMMPfam db_id=PF00830 from=5 to=72 evalue=3.7e-09 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwe2_scaffold_4663_7
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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6031..6189
-----------------
DNA (159bp)
protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR24353.1}; Flags: Fragment;; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
seg (db=Seg db_id=seg from=3 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
Displaying 7 items

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