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gwe2_scaffold_4996

Alias: PER_GWE2_39_6_71

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe2_scaffold_4996_1
GWF2_CPR3_35_18, CPR3, Bacteria

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3..437
-----------------
DNA (435bp)
protein (145aa)
seg (db=Seg db_id=seg from=10 to=23)
Galactose-binding domain-like (db=superfamily db_id=SSF49785 from=14 to=142 evalue=6.4e-07 interpro_id=IPR008979 interpro_description=Galactose-binding domain-like)
Tax=GWF2_CPR3_35_18
gwe2_scaffold_4996_2
GWF2_CPR3_35_18, CPR3, Bacteria

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447..1364
-----------------
DNA (918bp)
protein (306aa)
Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J291_9FLAO
Putative uncharacterized protein Tax=GWF2_CPR3_35_18
no description (db=HMMSmart db_id=SM00860 from=32 to=113 evalue=0.00015 interpro_id=IPR018958 interpro_description=Cell wall assembly/cell proliferation coordinating protein, KNR4-like)
gwe2_scaffold_4996_3
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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comp(1378..2229)
-----------------
DNA (852bp)
protein (284aa)
Uncharacterized membrane protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D0Y2_HALOH rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR24138.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
hypothetical protein
seg (db=Seg db_id=seg from=143 to=154)
gwe2_scaffold_4996_4
GWF2_CPR3_35_18, CPR3, Bacteria

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comp(2239..3312)
-----------------
DNA (1074bp)
protein (358aa)
RNA polymerase sigma factor n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX70_MAHA5 rbh
RNA polymerase sigma factor Tax=GWF2_CPR3_35_18
RNA polymerase sigma-70 subunit RpoD
seg (db=Seg db_id=seg from=37 to=46)
gwe2_scaffold_4996_5
GWF2_CPR3_35_18, CPR3, Bacteria

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comp(3330..5129)
-----------------
DNA (1800bp)
protein (600aa)
DNA primase n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DQC8_HALPG rbh
Primase protein {ECO:0000313|EMBL:KKP69526.1}; TaxID=1618350 species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWF2_35_18.;"
hypothetical protein
seg (db=Seg db_id=seg from=405 to=421)
gwe2_scaffold_4996_6
GWF2_CPR3_35_18, CPR3, Bacteria

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comp(5203..5682)
-----------------
DNA (480bp)
protein (160aa)
MutT/NUDIX family protein n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001743EB6
MutT/NUDIX family protein Tax=GWF2_CPR3_35_18
phosphohydrolase
NUDIX_BOX (db=PatternScan db_id=PS00893 from=52 to=73 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
gwe2_scaffold_4996_7
GWF2_CPR3_35_18, CPR3, Bacteria

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comp(5740..5916)
-----------------
DNA (177bp)
protein (59aa)
BETA (1-->2) glucan export composite transmembrane/ATP-binding protein Tax=GWF2_CPR3_35_18
LIPID A EXPORT ATP-BINDING/PERMEASE PROTEIN MSBA (db=HMMPanther db_id=PTHR19242:SF91 from=1 to=57 evalue=4.5e-10)
ATP-BINDING CASSETTE TRANSPORTER (db=HMMPanther db_id=PTHR19242 from=1 to=57 evalue=4.5e-10)
Displaying 7 items

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