ggKbase home page

gwe2_scaffold_5703

Alias: PER_GWE2_39_6_80

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe2_scaffold_5703_1
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists


comp(1..447)
-----------------
DNA (447bp)
protein (149aa)
Topoisomerase subunit A, DNA gyrase subunit A protein {ECO:0000313|EMBL:KKR23887.1}; EC=5.99.1.3 {ECO:0000313|EMBL:KKR23887.1};; Flags: Fragment;; TaxID=1619064 species="Bacteria; Peregrinibacteria.;"
DNA gyrase subunit A n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CR96_9RHOB
gyrA; DNA topoisomerase subunit A
Type II DNA topoisomerase (db=superfamily db_id=SSF56719 from=31 to=149 evalue=1.9e-46 interpro_id=IPR013760 interpro_description=DNA topoisomerase, type IIA, central GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), Molecular Function: ATP binding (GO:0005524), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
gwe2_scaffold_5703_2
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

581..1600
-----------------
DNA (1020bp)
protein (340aa)
sensory box/GGDEF protein n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=UPI00026D1F52
Diguanylate cyclase {ECO:0000313|EMBL:KKR23888.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
diguanylate cyclase
no description (db=HMMSmart db_id=SM00267 from=138 to=335 evalue=1.7e-08 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
gwe2_scaffold_5703_3
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

1730..3772
-----------------
DNA (2043bp)
protein (681aa)
Type IV secretory pathway VirB4 components-like protein n=3 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS14_9BACT rbh
Type IV secretory pathway VirB4 protein-like protein Tax=PER_GWF2_39_17
conjugal transfer protein TraC
seg (db=Seg db_id=seg from=15 to=30)
gwe2_scaffold_5703_4
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

3800..4330
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ03_9CHLR
Uncharacterized protein Tax=PER_GWF2_39_17
hypothetical protein
gwe2_scaffold_5703_5
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(4360..6141)
-----------------
DNA (1782bp)
protein (594aa)
Carboxy-terminal-processing protease, carboxyl-terminal processing protease {ECO:0000313|EMBL:KKR23891.1}; EC=3.4.21.102 {ECO:0000313|EMBL:KKR23891.1};; TaxID=1619064 species="Bacteria; Peregrinibacte
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SLA4_9CHLR
seg (db=Seg db_id=seg from=7 to=25)
gwe2_scaffold_5703_6
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

6312..6971
-----------------
DNA (660bp)
protein (220aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Displaying 6 items

View Taxonomy