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gwf2_scaffold_254

Alias: PER_GWF2_33_10_1

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_254_1
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(105..854)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YD17_9GAMM
transcriptional regulator TrmB Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transcriptional regulator TrmB
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=102 evalue=0.00059 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
gwf2_scaffold_254_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

968..2707
DNA (1740bp) protein (580aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=252 to=273 evalue=NA)
seg (db=Seg db_id=seg from=479 to=494)
gwf2_scaffold_254_3
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

2757..3074
DNA (318bp) protein (106aa)
id=5093930 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_254_4
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

3074..3703
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMY6_IGNAJ
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
(db=HMMPfam db_id=PF08843 from=19 to=153 evalue=3.8e-09 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
gwf2_scaffold_254_5
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

3711..4178
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP40495.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
gwf2_scaffold_254_6
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

4205..4390
DNA (186bp) protein (62aa)
Zinc finger, LIM-type Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
(db=HMMPfam db_id=PF00412 from=30 to=58 evalue=0.00023 interpro_id=IPR001781 interpro_description=Zinc finger, LIM-type GO=Molecular Function: zinc ion binding (GO:0008270))
gwf2_scaffold_254_7
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

4519..4941
DNA (423bp) protein (141aa)
Hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1JAY5_9ARCH
Hypothetical membrane protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=123 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_254_8
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

4946..5608
DNA (663bp) protein (221aa)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X8U7_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:KKP40498.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
protein of unknown function UPF0011
RSMI (db=PatternScan db_id=PS01296 from=79 to=90 evalue=0.0 interpro_id=IPR018063 interpro_description=SAM-dependent methyltransferase RsmI, conserved site GO=Molecular Function: methyltransferase activity (GO:0008168))
gwf2_scaffold_254_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(5621..6058)
DNA (438bp) protein (146aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
gwf2_scaffold_254_10
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

6205..6957
DNA (753bp) protein (251aa)
SPFH domain / Band 7 family protein n=2 Tax=Salinibacter ruber RepID=Q2S1U3_SALRD
SPFH domain-containing protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
SPFH protein
seg (db=Seg db_id=seg from=3 to=18)
gwf2_scaffold_254_11
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

6966..7772
DNA (807bp) protein (269aa)
Shikimate 5-dehydrogenase, shikimate dehydrogenase {ECO:0000313|EMBL:KKP40501.1}; EC=1.1.1.25 {ECO:0000313|EMBL:KKP40501.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibac
Shikimate dehydrogenase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJJ5_PYRSN
shikimate 5-dehydrogenase
(db=HMMPfam db_id=PF01488 from=112 to=212 evalue=1.8e-13 interpro_id=IPR006151 interpro_description=Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase)
gwf2_scaffold_254_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(7797..8609)
DNA (813bp) protein (271aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=234 to=265 evalue=NA)
seg (db=Seg db_id=seg from=15 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
gwf2_scaffold_254_13
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(8649..9137)
DNA (489bp) protein (163aa)
lspA; lipoprotein signal peptidase LspA (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K946_HALHC
lipoprotein signal peptidase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=13 to=22)
gwf2_scaffold_254_14
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

9175..9906
DNA (732bp) protein (244aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=225 to=238)
gwf2_scaffold_254_15
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

9965..11305
DNA (1341bp) protein (447aa)
Stage V sporulation protein E n=6 Tax=Clostridium thermocellum RepID=A3DE28_CLOTH
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
stage V sporulation protein E
seg (db=Seg db_id=seg from=98 to=107)
gwf2_scaffold_254_16
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

11355..12296
DNA (942bp) protein (314aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyroph
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase n=1 Tax=Sporolactobacillus inulinus CASD RepID=UPI000255C274
(db=HMMPfam db_id=PF04101 from=147 to=299 evalue=1.9e-32 interpro_id=IPR007235 interpro_description=Glycosyl transferase, family 28, C-terminal GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758), Molecular Function: carbohydrate binding (GO:0030246), Biological Process: lipid glycosylation (GO:0030259))
gwf2_scaffold_254_17
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

12336..12872
DNA (537bp) protein (179aa)
LemA-like domain Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=2 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
LemA-like (db=superfamily db_id=SSF140478 from=29 to=178 evalue=4.0e-08 interpro_id=IPR023353 interpro_description=LemA-like domain)
gwf2_scaffold_254_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(12873..13469)
DNA (597bp) protein (199aa)
Uncharacterized protein n=4 Tax=Mycobacterium avium RepID=A0QKX5_MYCA1
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
putative transmembrane protein
seg (db=Seg db_id=seg from=21 to=49)
gwf2_scaffold_254_19
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(13556..14227)
DNA (672bp) protein (224aa)
pgl; hypothetical protein; K01057 6-phosphogluconolactonase [EC:3.1.1.31] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Probable 6-phosphogluconolactonase n=1 Tax=Dictyostelium discoideum RepID=6PGL_DICDI
6-phosphogluconolactonase
seg (db=Seg db_id=seg from=87 to=97)
gwf2_scaffold_254_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(14272..15906)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Campylobacter phage CP21 RepID=I7KLS9_9CAUD
Uncharacterized protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
gwf2_scaffold_254_21
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(15941..17662)
DNA (1722bp) protein (574aa)
Glucocorticoid receptor-like (DNA-binding domain) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=62 to=92 evalue=0.0059)
seg (db=Seg db_id=seg from=221 to=232)
gwf2_scaffold_254_22
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(17825..19546)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Campylobacter phage CP21 RepID=I7KLS9_9CAUD
Uncharacterized protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_254_23
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(19566..21218)
DNA (1653bp) protein (551aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP40513.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
gwf2_scaffold_254_24
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

21362..22102
DNA (741bp) protein (247aa)
Transcriptional regulator TrmB n=1 Tax=Celeribacter baekdonensis B30 RepID=K2K127_9RHOB
transcriptional regulator TrmB Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Transcriptional regulator, TrmB
coiled-coil (db=Coil db_id=coil from=86 to=107 evalue=NA)
gwf2_scaffold_254_25
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(22099..22575)
DNA (477bp) protein (159aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_254_26
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(22581..23840)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Campylobacter fetus subsp. fetus RepID=D8LA00_CAMFE
Uncharacterized protein {ECO:0000313|EMBL:KKP40516.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
gwf2_scaffold_254_27
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

23979..24737
DNA (759bp) protein (253aa)
Transcriptional regulator, TrmB n=1 Tax=sediment metagenome RepID=D9PN94_9ZZZZ
Transcriptional regulator TrmB {ECO:0000313|EMBL:KKP40517.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
iclR helix-turn-helix domain protein
(db=HMMPfam db_id=PF01978 from=8 to=73 evalue=3.4e-11 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
gwf2_scaffold_254_28
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

24823..27081
DNA (2259bp) protein (753aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH rbh
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=340 to=355)
gwf2_scaffold_254_29
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

27277..28113
DNA (837bp) protein (279aa)
membrane protein n=1 Tax=Serinicoccus profundi MCCC 1A05965 RepID=UPI000255ECE4
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=2 to=19)
gwf2_scaffold_254_30
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

28428..34844
DNA (6417bp) protein (2139aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6R1_CALAS rbh
hypothetical protein; K06894 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=10 to=25)
Displaying items 1-30 of 102 in total

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