Alias: PER_GWF2_33_10_7
name | lists | location/seqs | annotations | notes |
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gwf2_scaffold_1389_1
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria
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Not on your lists |
2..154
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Uncharacterized protein {ECO:0000313|EMBL:KKP38166.1}; Flags: Fragment;; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
(db=HMMPfam db_id=PF00395 from=2 to=39 evalue=3.9e-09 interpro_id=IPR001119 interpro_description=S-layer homology domain)
SLH (db=ProfileScan db_id=PS51272 from=1 to=50 evalue=13.688 interpro_id=IPR001119 interpro_description=S-layer homology domain)
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gwf2_scaffold_1389_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(196..1356)
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tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABY7_CARHZ
rbh
QUEUINE TRNA-RIBOSYLTRANSFERASE (db=HMMPanther db_id=PTHR11962 from=18 to=381 evalue=1.6e-121 interpro_id=IPR002616 interpro_description=Queuine/other tRNA-ribosyltransferase GO=Biological Process: tRNA modification (GO:0006400), Molecular Function: queuine tRNA-ribosyltransferase activity (GO:0008479), Biological Process: queuosine biosynthetic process (GO:0008616))
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gwf2_scaffold_1389_3
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
1451..1675
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seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=12 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
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gwf2_scaffold_1389_4
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(1714..3555)
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Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=193 to=209)
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gwf2_scaffold_1389_5
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
3649..5232
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coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=254 to=294 evalue=NA)
seg (db=Seg db_id=seg from=116 to=131)
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gwf2_scaffold_1389_6
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(5183..6283)
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Glycosyl transferase group 1 n=1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S805_CALKI
glycosyl transferase group 1 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
glycosyl transferase group 1
GLYCOSYL TRANSFERASE (db=HMMPanther db_id=PTHR12526:SF21 from=2 to=364 evalue=1.1e-99)
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gwf2_scaffold_1389_7
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(6301..6615)
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id=5094302 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
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gwf2_scaffold_1389_8
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(6743..8143)
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seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
lipid A core-O-antigen ligase
seg (db=Seg db_id=seg from=122 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
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gwf2_scaffold_1389_9
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria
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Not on your lists |
comp(8154..8426)
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30S ribosomal protein S20 n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J816_MARPK
30S ribosomal protein S20, small subunit ribosomal protein S20 {ECO:0000313|EMBL:KKP39443.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_1
30S ribosomal protein S20
Ribosomal protein S20 (db=superfamily db_id=SSF46992 from=3 to=86 evalue=1.3e-17 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1389_10
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(8513..9268)
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id=5094305 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
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gwf2_scaffold_1389_11
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
9409..9945
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seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=117 to=132)
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gwf2_scaffold_1389_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
10222..12642
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UvrABC system protein C n=2 Tax=Clostridium RepID=UVRC_CLONN
rbh
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
uvrC; excinuclease ABC subunit C
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=500 to=619 evalue=0.00055 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
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gwf2_scaffold_1389_13
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
12749..13417
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ATP-dependent Clp protease, proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Turicibacter RepID=D4W530_9FIRM
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP
CLP_PROTEASE_SER (db=PatternScan db_id=PS00381 from=115 to=126 evalue=0.0 interpro_id=IPR018215 interpro_description=Peptidase S14, ClpP, active site GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
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gwf2_scaffold_1389_14
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(13490..13804)
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transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
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gwf2_scaffold_1389_15
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
13907..14605
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id=5094310 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
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gwf2_scaffold_1389_16
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(14602..15327)
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putative FMN reductase (EC:1.5.1.29); K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Putative FMN reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB81_9BACT
phenol 2-monooxygenase
no description (db=Gene3D db_id=G3DSA:2.40.30.10 from=3 to=97 evalue=1.1e-13)
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gwf2_scaffold_1389_17
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
15518..16015
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transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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gwf2_scaffold_1389_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
16061..17284
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Putative permease often clustered with de novo purine synthesis n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CCD4_9CLOT
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
putative membrane protein
seg (db=Seg db_id=seg from=82 to=96)
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gwf2_scaffold_1389_19
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
17308..18663
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coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=309 to=330 evalue=NA)
seg (db=Seg db_id=seg from=317 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
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gwf2_scaffold_1389_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
18664..19416
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lgt; Prolipoprotein diacylglyceryl transferase 2 (EC:2.4.99.-) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
lgt; Prolipoprotein diacylglyceryl transferase 2 (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RE84_9DELT
seg (db=Seg db_id=seg from=88 to=99)
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gwf2_scaffold_1389_21
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
19410..19733
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seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=94 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
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gwf2_scaffold_1389_22
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(19740..20402)
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Transcription elongation factor GreA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CM38_9CLOT
transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transcription elongation factor GreA
GREAB_1 (db=PatternScan db_id=PS00829 from=82 to=113 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784))
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gwf2_scaffold_1389_23
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria
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Not on your lists |
comp(20442..21611)
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RNA polymerase sigma factor n=1 Tax=Clostridium ultunense Esp RepID=M1Z3C1_9CLOT
rbh
RNA polymerase sigma factor RpoD, RNA polymerase primary sigma factor {ECO:0000313|EMBL:KKP39457.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GW
RNA polymerase sigma factor RpoD
SIGMA70_1 (db=PatternScan db_id=PS00715 from=183 to=196 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
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gwf2_scaffold_1389_24
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(21615..23372)
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DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXH2_HALOH
rbh
(db=HMMPfam db_id=PF01807 from=3 to=93 evalue=1.1e-30 interpro_id=IPR002694 interpro_description=Zinc finger, CHC2-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication (GO:0006260), Molecular Function: zinc ion binding (GO:0008270))
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gwf2_scaffold_1389_25
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(23350..24429)
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glycosyl transferase, family 4, conserved region; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E214_9FIRM
glycosyl transferase, family 4, conserved region
seg (db=Seg db_id=seg from=326 to=337)
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gwf2_scaffold_1389_26
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(24429..25397)
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tRNA pseudouridine 55 synthase; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
tRNA pseudouridine synthase B n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J3A8_MARPK
tRNA pseudouridine 55 synthase
TRNA-PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR13767 from=97 to=263 evalue=1.7e-39 interpro_id=IPR014780 interpro_description=tRNA pseudouridine synthase II, TruB GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
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gwf2_scaffold_1389_27
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
25492..27873
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phosphoketolase; K01636 [EC:4.1.2.-] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Phosphoketolase (EC:4.1.2.9)
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VSY3_9CYAN
rbh
Phosphoketolase (db=HMMPIR db_id=PIRSF017245 from=1 to=793 evalue=0.0 interpro_id=IPR005593 interpro_description=Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: aldehyde-lyase activity (GO:0016832))
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gwf2_scaffold_1389_28
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(27877..28554)
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50S ribosomal protein L25 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IAT3_9CHLR
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=180 to=210)
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gwf2_scaffold_1389_29
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria
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Not on your lists |
comp(28725..29948)
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ABC transporter, permease protein n=1 Tax=sediment metagenome RepID=D9PI56_9ZZZZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP39463.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
multidrug ABC transporter substrate-binding protein
seg (db=Seg db_id=seg from=27 to=53)
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gwf2_scaffold_1389_30
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(29965..30651)
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ABC-type transport system n=2 Tax=Eggerthella RepID=F7UVR0_EEGSY
PhnL; ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ABC transporter
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=143 to=157 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
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