Alias: PER_GWF2_33_10_10
name | lists | location/seqs | annotations | notes |
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gwf2_scaffold_1558_1
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
349..4179
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DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EER4_9CHLR
rbh
DNA-directed RNA polymerase subunit beta
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR20856:SF3 from=391 to=1164 evalue=0.0 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
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gwf2_scaffold_1558_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
4294..8121
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rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=8 Tax=Dehalococcoides mccartyi RepID=RPOC_DEHSC
rbh
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=3 to=1265 evalue=0.0)
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gwf2_scaffold_1558_3
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
8217..8630
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30S ribosomal protein S12 n=3 Tax=Spiroplasma RepID=G9XYC0_SPIME
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=56 to=63 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_4
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
8650..9117
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30S ribosomal protein S7 n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YY23_9THEM
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
30S ribosomal protein S7
no description (db=Gene3D db_id=G3DSA:1.10.455.10 from=21 to=147 evalue=1.3e-42 interpro_id=IPR023798 interpro_description=Ribosomal protein S7 domain)
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gwf2_scaffold_1558_5
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
9421..10740
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Conserved uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NGH0_DESTT
rbh
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=145 to=159)
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gwf2_scaffold_1558_6
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria
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Not on your lists |
comp(10890..15428)
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Uncharacterized protein {ECO:0000313|EMBL:KKP39023.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
seg (db=Seg db_id=seg from=167 to=180)
CALPAIN_CAT (db=ProfileScan db_id=PS50203 from=1247 to=1480 evalue=9.264 interpro_id=IPR001300 interpro_description=Peptidase C2, calpain, catalytic domain GO=Molecular Function: calcium-dependent cysteine-type endopeptidase activity (GO:0004198), Cellular Component: intracellular (GO:0005622), Biological Process: proteolysis (GO:0006508))
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gwf2_scaffold_1558_7
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
comp(15421..15762)
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coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=45 to=69 evalue=NA)
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gwf2_scaffold_1558_8
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria
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Not on your lists |
16025..17605
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Elongation factor G n=18 Tax=Bacillaceae RepID=EFG_ANOFW
rbh
Elongation factor G, elongation factor G {ECO:0000313|EMBL:KKP39025.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
fusA; elongation factor G
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=49 to=64 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
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gwf2_scaffold_1558_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
17566..18066
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Elongation factor G n=3 Tax=Eggerthella RepID=C8WP43_EGGLE
fusA; elongation factor G; K02355 elongation factor G Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
fusA; elongation factor G
EUKARYOTIC TRANSLATION ELONGATION FACTOR 2 (db=HMMPanther db_id=PTHR23115:SF4 from=71 to=161 evalue=1.4e-12)
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gwf2_scaffold_1558_10
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
18205..19395
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Elongation factor Tu n=5 Tax=Alteromonadaceae RepID=F5Z9Y9_ALTSS
rbh
translation elongation factor Tu Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
tuf; Elongation factor Tu 2
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=52 to=67 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
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gwf2_scaffold_1558_11
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
19406..19729
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30S ribosomal protein S10 n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X476_DESRD
rpsJ; 30S ribosomal protein S10 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rpsJ; 30S ribosomal protein S10
no description (db=Gene3D db_id=G3DSA:3.30.70.600 from=3 to=107 evalue=1.3e-28 interpro_id=IPR001848 interpro_description=Ribosomal protein S10 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
19852..20433
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50S ribosomal protein L3 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RL3_GEOUR
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rplC; 50S ribosomal protein L3
seg (db=Seg db_id=seg from=146 to=158)
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gwf2_scaffold_1558_13
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
20449..21078
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50S ribosomal protein L4 n=1 Tax=Lactobacillus gigeriorum CRBIP 24.85 RepID=I7LFF7_9LACO
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L4
no description (db=Gene3D db_id=G3DSA:3.40.1370.10 from=2 to=208 evalue=4.3e-33 interpro_id=IPR023574 interpro_description=Ribosomal protein L4 domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_14
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
21113..21457
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50S ribosomal protein L23 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECR5_RUNSL
50S ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L25
seg (db=Seg db_id=seg from=95 to=113)
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gwf2_scaffold_1558_15
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
21506..22333
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50S ribosomal protein L2 n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJM0_SYNLT
rbh
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L2
50S RIBOSOMAL PROTEIN L2 (db=HMMPanther db_id=PTHR13691:SF5 from=93 to=275 evalue=1.9e-81 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740))
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gwf2_scaffold_1558_16
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
22382..22672
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30S ribosomal protein S19 n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFS6_9BACT
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rpsS; 30S ribosomal protein S19
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=53 to=77 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
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gwf2_scaffold_1558_17
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
22692..23093
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50S ribosomal protein L22 n=6 Tax=Thermotoga RepID=RL22_THEMA
LSU ribosomal protein L22p (L17e) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rplV; 50S ribosomal protein L22
RIBOSOMAL_L22 (db=PatternScan db_id=PS00464 from=81 to=105 evalue=0.0 interpro_id=IPR018260 interpro_description=Ribosomal protein L22/L17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
23119..23781
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SSU ribosomal protein S3p (S3e) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQS0_9CLOT
ribosomal protein S3P Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rpsC; 30S ribosomal protein S3
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=163 to=197 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_19
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
23811..24230
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50S ribosomal protein L16 n=5 Tax=Desulfotomaculum RepID=RL16_DESRM
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L16
RIBOSOMAL_L16_1 (db=PatternScan db_id=PS00586 from=62 to=73 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
24235..24414
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Ribosomal protein L29 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
no description (db=Gene3D db_id=G3DSA:1.10.287.310 from=2 to=59 evalue=0.00027 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=2 to=59 evalue=3.5e-08 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
(db=HMMPfam db_id=PF00831 from=5 to=59 evalue=4.4e-12 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_21
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
24445..24678
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30S ribosomal protein S17 n=3 Tax=Azospirillum RepID=D3NS49_AZOS1
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rpsQ; 30S ribosomal protein S17
RIBOSOMAL_S17 (db=PatternScan db_id=PS00056 from=52 to=64 evalue=0.0 interpro_id=IPR019979 interpro_description=Ribosomal protein S17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_22
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
24715..25083
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50S ribosomal protein L14 n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=RL14_CHLT3
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rplN; 50S ribosomal protein L14
RIBOSOMAL_L14 (db=PatternScan db_id=PS00049 from=60 to=86 evalue=0.0 interpro_id=IPR019972 interpro_description=Ribosomal protein L14 conserved site)
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gwf2_scaffold_1558_23
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
25108..25428
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Ribosomal protein L24 n=1 Tax=human gut metagenome RepID=K1RV78_9ZZZZ
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L24
seg (db=Seg db_id=seg from=87 to=97)
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gwf2_scaffold_1558_24
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
25497..26051
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50S ribosomal protein L5 n=3 Tax=Halanaerobium RepID=E3DPV9_HALPG
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L5
no description (db=Gene3D db_id=G3DSA:3.30.1440.10 from=1 to=178 evalue=1.1e-54 interpro_id=IPR022803 interpro_description=Ribosomal protein L5 domain)
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gwf2_scaffold_1558_25
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
26062..26286
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30S ribosomal protein S14 type Z n=3 Tax=Halanaerobium RepID=E3DPV8_HALPG
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
30S ribosomal protein S14
RIBOSOMAL_S14 (db=PatternScan db_id=PS00527 from=36 to=58 evalue=0.0 interpro_id=IPR018271 interpro_description=Ribosomal protein S14, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_26
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria
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Not on your lists |
26407..26778
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30S ribosomal protein S8 n=1 Tax=Oenococcus kitaharae DSM 17330 RepID=G9WFJ0_9LACT
30S ribosomal protein S8, small subunit ribosomal protein S8 {ECO:0000313|EMBL:KKP39043.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.
30S ribosomal protein S8
RIBOSOMAL_S8 (db=PatternScan db_id=PS00053 from=93 to=110 evalue=0.0 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_27
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria
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Not on your lists |
26815..27360
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50S ribosomal protein L6 n=2 Tax=Thermanaerovibrio RepID=D1B5W0_THEAS
50S ribosomal protein L6, large subunit ribosomal protein L6 {ECO:0000313|EMBL:KKP39044.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.
50S ribosomal protein L6
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=156 to=164 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1558_28
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
27379..27729
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50S ribosomal protein L18 n=1 Tax=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) RepID=B5Y971_COPPD
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rplR; 50S ribosomal protein L18
no description (db=Gene3D db_id=G3DSA:3.30.420.100 from=28 to=116 evalue=1.8e-25)
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gwf2_scaffold_1558_29
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
27749..28381
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30S ribosomal protein S5 n=2 Tax=Roseiflexus RepID=RS5_ROSS1
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rpsE; 30S ribosomal protein S5
RIBOSOMAL_S5 (db=PatternScan db_id=PS00585 from=32 to=64 evalue=0.0 interpro_id=IPR018192 interpro_description=Ribosomal protein S5, N-terminal, conserved site)
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gwf2_scaffold_1558_30
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria
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Not on your lists |
28398..28844
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50S ribosomal protein L15 n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=RL15_SYNWW
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L15
seg (db=Seg db_id=seg from=2 to=15)
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