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gwf2_scaffold_2451

Alias: PER_GWF2_33_10_20

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_2451_1
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

2..118
DNA (117bp) protein (39aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP38192.1}; Flags: Fragment;; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
(db=HMMPfam db_id=PF01541 from=2 to=30 evalue=2.6e-07 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
gwf2_scaffold_2451_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

394..684
DNA (291bp) protein (97aa)
id=5094767 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_2451_3
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(693..1580)
DNA (888bp) protein (296aa)
PfkB domain-containing protein; K00856 adenosine kinase [EC:2.7.1.20] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Adenosine kinase, putative n=1 Tax=beta proteobacterium KB13 RepID=B6BUZ7_9PROT
PfkB domain-containing protein
seg (db=Seg db_id=seg from=233 to=245)
gwf2_scaffold_2451_4
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(1858..3978)
DNA (2121bp) protein (707aa)
Translation initiation factor IF-2 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=IF2_ALKOO rbh
Translation initiation factor IF-2, translation initiation factor IF-2 {ECO:0000313|EMBL:KKP38195.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_G
translation initiation factor IF-2
seg (db=Seg db_id=seg from=88 to=114)
gwf2_scaffold_2451_5
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(4086..5753)
DNA (1668bp) protein (556aa)
S-layer protein n=4 Tax=Bacillus cereus group RepID=B7IYR0_BACC2
KWG repeat protein,putative S-layer protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
KWG repeat protein,putative S-layer protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
gwf2_scaffold_2451_6
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

5831..5959
DNA (129bp) protein (43aa)
id=5094771 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_2451_7
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

5964..6602
DNA (639bp) protein (213aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=67 to=88 evalue=NA)
gwf2_scaffold_2451_8
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists


comp(6652..8127)
DNA (1476bp) protein (492aa)
Prolyl-tRNA synthetase, prolyl-tRNA synthetase {ECO:0000313|EMBL:KKP38199.1}; EC=6.1.1.15 {ECO:0000313|EMBL:KKP38199.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteri
prolyl-tRNA synthetase n=1 Tax=Anaerophaga sp. HS1 RepID=UPI000255DCB3 rbh
prolyl-tRNA synthetase, family I
seg (db=Seg db_id=seg from=309 to=329)
gwf2_scaffold_2451_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(8197..9990)
DNA (1794bp) protein (598aa)
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
coiled-coil (db=Coil db_id=coil from=405 to=426 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=217)
gwf2_scaffold_2451_10
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(10079..11341)
DNA (1263bp) protein (421aa)
cell division protein (septum formation) n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B214C rbh
Cell division protein FtsA {ECO:0000313|EMBL:KKP38201.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
actin
seg (db=Seg db_id=seg from=230 to=250)
gwf2_scaffold_2451_11
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(11380..12009)
DNA (630bp) protein (210aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=7 to=17)
gwf2_scaffold_2451_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

12136..13968
DNA (1833bp) protein (611aa)
Elongation factor 4 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2N8_THEOJ rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
GTP-binding protein LepA
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=41 to=56 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
gwf2_scaffold_2451_13
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(13982..15091)
DNA (1110bp) protein (370aa)
Alanine racemase, alanine racemase {ECO:0000313|EMBL:KKP38204.1}; EC=5.1.1.1 {ECO:0000313|EMBL:KKP38204.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium G
Alanine racemase n=2 Tax=Leptospira RepID=I0XQW2_9LEPT
alr; alanine racemase
ALANINE_RACEMASE (db=PatternScan db_id=PS00395 from=32 to=41 evalue=0.0 interpro_id=IPR020622 interpro_description=Alanine racemase, pyridoxal-phosphate attachment site GO=Biological Process: alanine metabolic process (GO:0006522), Molecular Function: alanine racemase activity (GO:0008784))
gwf2_scaffold_2451_14
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(15118..16560)
DNA (1443bp) protein (481aa)
SLEI family protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=Q23WR6_TETTS
TPR repeat-containing protein; K12600 superkiller protein 3 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
GTP cyclohydrolase III (methanopterin)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_2451_15
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(16579..17058)
DNA (480bp) protein (160aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Clostridiales RepID=E0QJW8_9FIRM
crossover junction endodeoxyribonuclease RuvC
RUVC (db=PatternScan db_id=PS01321 from=113 to=148 evalue=0.0 interpro_id=IPR020563 interpro_description=Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO=Molecular Function: crossover junction endodeoxyribonuclease activity (GO:0008821))
gwf2_scaffold_2451_16
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(17039..18103)
DNA (1065bp) protein (355aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6J8_9BACL rbh
seg (db=Seg db_id=seg from=147 to=159)
gwf2_scaffold_2451_17
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(18122..19672)
DNA (1551bp) protein (517aa)
ABC-type dipeptide transport system, periplasmic component n=2 Tax=Brevibacillus RepID=J2H5Q6_9BACL
ABC transporter substrate-binding protein, peptide/nickel transport system substrate-binding protein {ECO:0000313|EMBL:KKP38208.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregr
ABC transporter substrate-binding protein
coiled-coil (db=Coil db_id=coil from=442 to=463 evalue=NA)
gwf2_scaffold_2451_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(19684..20226)
DNA (543bp) protein (181aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=114 to=135 evalue=NA)
seg (db=Seg db_id=seg from=13 to=31)
gwf2_scaffold_2451_19
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

20612..20962
DNA (351bp) protein (117aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=82 to=103 evalue=NA)
seg (db=Seg db_id=seg from=98 to=107)
gwf2_scaffold_2451_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(21029..21382)
DNA (354bp) protein (118aa)
id=5094785 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_2451_21
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(21405..23063)
DNA (1659bp) protein (553aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP38212.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
seg (db=Seg db_id=seg from=308 to=322)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=22 evalue=6.0)
gwf2_scaffold_2451_22
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(23114..24199)
DNA (1086bp) protein (362aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Xaa-Pro aminopeptidase n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RAE3_THETN
peptidase M24
seg (db=Seg db_id=seg from=108 to=122)
gwf2_scaffold_2451_23
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(24196..24780)
DNA (585bp) protein (195aa)
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium ultunense Esp RepID=M1Z7K1_9CLOT
no description (db=HMMSmart db_id=SM00278 from=72 to=91 evalue=0.55 interpro_id=IPR003583 interpro_description=Helix-hairpin-helix DNA-binding motif, class 1 GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281))
gwf2_scaffold_2451_24
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists


25083..25604
DNA (522bp) protein (174aa)
LSU ribosomal protein L10p (P0) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CY38_9CLOT
50S ribosomal protein L10p; K02864 large subunit ribosomal protein L10 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L10p
seg (db=Seg db_id=seg from=107 to=120)
gwf2_scaffold_2451_25
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists


25688..26089
DNA (402bp) protein (134aa)
50S ribosomal protein L7/L12 n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J5G0_MARPK
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L7/L12
seg (db=Seg db_id=seg from=42 to=62)
gwf2_scaffold_2451_26
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

26276..27478
DNA (1203bp) protein (401aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP38217.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
coiled-coil (db=Coil db_id=coil from=154 to=175 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
seg (db=Seg db_id=seg from=116 to=129)
gwf2_scaffold_2451_27
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

27483..28088
DNA (606bp) protein (202aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
seg (db=Seg db_id=seg from=12 to=23)
gwf2_scaffold_2451_28
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

28163..29392
DNA (1230bp) protein (410aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LUC2_HIPMA rbh
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Type II secretion system protein E
seg (db=Seg db_id=seg from=157 to=168)
gwf2_scaffold_2451_29
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

29415..30671
DNA (1257bp) protein (419aa)
Type II secretion system F domain protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RGZ6_DESPD
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
type II secretion system F domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=203)
gwf2_scaffold_2451_30
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

30707..31330
DNA (624bp) protein (208aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=14 to=29)
Displaying items 1-30 of 36 in total

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