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gwf2_scaffold_2811

Alias: PER_GWF2_33_10_23

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_2811_1
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(3..254)
DNA (252bp) protein (84aa)
phosphotransacetylase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DF49_9PORP
Isocitrate/Isopropylmalate dehydrogenase-like (db=superfamily db_id=SSF53659 from=1 to=65 evalue=1.1e-10)
gwf2_scaffold_2811_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(306..848)
DNA (543bp) protein (181aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=7 Tax=Dehalococcoides mccartyi RepID=A5FR45_DEHSB
(db=HMMPfam db_id=PF10369 from=105 to=178 evalue=1.4e-30 interpro_id=IPR019455 interpro_description=Acetolactate synthase, small subunit, C-terminal)
gwf2_scaffold_2811_3
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(935..2665)
DNA (1731bp) protein (577aa)
acetolactate synthase large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Acetolactate synthase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZM7_HERA2 rbh
acetolactate synthase large subunit, biosynthetic type
TPP_ENZYMES (db=PatternScan db_id=PS00187 from=441 to=460 evalue=0.0 interpro_id=IPR000399 interpro_description=TPP-binding enzyme, conserved site GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: transferase activity (GO:0016740), Molecular Function: thiamine pyrophosphate binding (GO:0030976))
gwf2_scaffold_2811_4
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(2836..3549)
DNA (714bp) protein (238aa)
RNAse III (EC:3.1.26.3) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Ribonuclease 3 n=1 Tax=sediment metagenome RepID=D9PK52_9ZZZZ
hypothetical protein
RNASE_3_1 (db=PatternScan db_id=PS00517 from=47 to=55 evalue=0.0 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
gwf2_scaffold_2811_5
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(3563..4033)
DNA (471bp) protein (157aa)
N utilization substance protein B homolog n=2 Tax=Bacillus coagulans RepID=F7Z5E6_BACC6
NusB antitermination factor; K03625 N utilization substance protein B Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
NusB antitermination factor
no description (db=Gene3D db_id=G3DSA:1.10.940.10 from=5 to=145 evalue=2.8e-27 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
gwf2_scaffold_2811_6
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists


comp(4152..4391)
DNA (240bp) protein (80aa)
Ribosomal protein L32p Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=11 to=17)
rpmF_bact: ribosomal protein L32 (db=HMMTigr db_id=TIGR01031 from=5 to=66 evalue=1.2e-12 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
(db=HMMPfam db_id=PF01783 from=6 to=66 evalue=3.7e-15 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
gwf2_scaffold_2811_7
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

4649..10120
DNA (5472bp) protein (1824aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=455 to=487 evalue=NA)
seg (db=Seg db_id=seg from=3 to=27)
gwf2_scaffold_2811_8
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

10151..10531
DNA (381bp) protein (127aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=54 to=65)
gwf2_scaffold_2811_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

10648..14016
DNA (3369bp) protein (1123aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=245 to=266 evalue=NA)
seg (db=Seg db_id=seg from=212 to=229)
gwf2_scaffold_2811_10
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

14141..18478
DNA (4338bp) protein (1446aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP38061.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
coiled-coil (db=Coil db_id=coil from=55 to=76 evalue=NA)
seg (db=Seg db_id=seg from=469 to=480)
gwf2_scaffold_2811_11
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

18508..19461
DNA (954bp) protein (318aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=281 to=312)
gwf2_scaffold_2811_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

19482..19949
DNA (468bp) protein (156aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=8 to=22)
gwf2_scaffold_2811_13
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(19885..20010)
DNA (126bp) protein (42aa)
id=5094884 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_2811_14
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

20208..21083
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZS64_ANACC
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=5 to=19)
gwf2_scaffold_2811_15
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

21313..22419
DNA (1107bp) protein (369aa)
id=5094886 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_2811_16
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

22484..22687
DNA (204bp) protein (68aa)
tRNA delta(2)-isopentenylpyrophosphate transferase, tRNA dimethylallyltransferase {ECO:0000313|EMBL:KKP38067.1}; EC=2.5.1.75 {ECO:0000313|EMBL:KKP38067.1};; TaxID=1619065 species="Bacteria; Peregrinib
miaA; tRNA Delta(2)-isopentenylpyrophosphate transferase MiaA (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXH8_CLOA9
seg (db=Seg db_id=seg from=11 to=27)
gwf2_scaffold_2811_17
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

22957..25197
DNA (2241bp) protein (747aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP38068.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
seg (db=Seg db_id=seg from=64 to=84)
gwf2_scaffold_2811_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

25268..25450
DNA (183bp) protein (61aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
miaA; tRNA Delta(2)-isopentenylpyrophosphate transferase MiaA (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXH8_CLOA9
seg (db=Seg db_id=seg from=11 to=27)
Displaying 18 items

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