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gwf2_scaffold_4156

Alias: PER_GWF2_33_10_32

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_4156_1
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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comp(2..862)
DNA (861bp) protein (287aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curat
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZV7_SORC5 rbh
SAICAR_SYNTHETASE_1 (db=PatternScan db_id=PS01057 from=101 to=115 evalue=0.0 interpro_id=IPR018236 interpro_description=SAICAR synthetase, conserved site GO=Molecular Function: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (GO:0004639), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
gwf2_scaffold_4156_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(910..2187)
DNA (1278bp) protein (426aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XL84_CALS8
seg (db=Seg db_id=seg from=264 to=279)
gwf2_scaffold_4156_3
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(2198..2959)
DNA (762bp) protein (254aa)
TatD family hydrolase, TatD DNase family protein {ECO:0000313|EMBL:KKP37209.1}; EC=3.1.21.- {ECO:0000313|EMBL:KKP37209.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacte
TatD-related deoxyribonuclease n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXH3_DESAC
hydrolase TatD
TATD_2 (db=PatternScan db_id=PS01090 from=125 to=135 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
gwf2_scaffold_4156_4
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

3253..4383
DNA (1131bp) protein (377aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta n=3 Tax=Photobacterium RepID=L8JIY3_9GAMM rbh
3-deoxy-7-phosphoheptulonate synthase
PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE (db=HMMPanther db_id=PTHR21057:SF1 from=85 to=376 evalue=1.0e-135)
gwf2_scaffold_4156_5
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

4477..4812
DNA (336bp) protein (112aa)
id=5095078 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_4156_6
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists


comp(4893..5174)
DNA (282bp) protein (94aa)
50S ribosomal protein L27 n=1 Tax=Wigglesworthia glossinidia brevipalpis RepID=RL27_WIGBR
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rpmA; 50S ribosomal protein L27
seg (db=Seg db_id=seg from=66 to=76)
gwf2_scaffold_4156_7
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

5353..6969
DNA (1617bp) protein (539aa)
GRIP and coiled-coil domain-containing protein 2 n=1 Tax=Myotis davidii RepID=L5LUN4_MYODS
Viral A-type inclusion protein repeat containing protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Viral A-type inclusion protein repeat containing protein
coiled-coil (db=Coil db_id=coil from=88 to=123 evalue=NA)
gwf2_scaffold_4156_8
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

7020..8366
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TMU9_METAC
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
coiled-coil (db=Coil db_id=coil from=129 to=150 evalue=NA)
gwf2_scaffold_4156_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(8363..10450)
DNA (2088bp) protein (696aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ATP-dependent DNA helicase RecG n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCP1_THET1 rbh
ATP-dependent DNA helicase RecG
seg (db=Seg db_id=seg from=518 to=528)
gwf2_scaffold_4156_10
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(10544..11734)
DNA (1191bp) protein (397aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=7 to=25)
gwf2_scaffold_4156_11
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(11877..13922)
DNA (2046bp) protein (682aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP37217.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
seg (db=Seg db_id=seg from=209 to=223)
gwf2_scaffold_4156_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(14191..14592)
DNA (402bp) protein (134aa)
Single-stranded DNA-binding protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TPK4_MARTH
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
single-stranded DNA-binding protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=2 to=113 evalue=1.5e-30 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
gwf2_scaffold_4156_13
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

14793..15422
DNA (630bp) protein (210aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Thermincola potens (strain JR) RepID=D5X7R1_THEPJ
seg (db=Seg db_id=seg from=175 to=189)
gwf2_scaffold_4156_14
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(15486..16370)
DNA (885bp) protein (295aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=45 to=60)
Displaying 14 items

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