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gwf2_scaffold_5981

Alias: PER_GWF2_33_10_35

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_5981_1
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(3..251)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36950.1}; Flags: Fragment;; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA)
seg (db=Seg db_id=seg from=48 to=62)
gwf2_scaffold_5981_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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388..2496
-----------------
DNA (2109bp)
protein (703aa)
Uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HS53_LEGLN
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=366 to=672 evalue=5.2e-14)
gwf2_scaffold_5981_3
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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2499..3362
-----------------
DNA (864bp)
protein (288aa)
Uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HS54_LEGLN
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
coiled-coil (db=Coil db_id=coil from=22 to=43 evalue=NA)
gwf2_scaffold_5981_4
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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3366..4481
-----------------
DNA (1116bp)
protein (372aa)
TIGR01210 family protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TAN7_9EURY
radical SAM protein; K06936 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
radical SAM protein
no description (db=HMMSmart db_id=SM00729 from=53 to=280 evalue=1.0e-08 interpro_id=IPR006638 interpro_description=Elongator protein 3/MiaB/NifB GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
gwf2_scaffold_5981_5
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(4488..5384)
-----------------
DNA (897bp)
protein (299aa)
Inositol monophosphatase, myo-inositol-1(Or 4)-monophosphatase {ECO:0000313|EMBL:KKP36954.1}; EC=3.1.3.25 {ECO:0000313|EMBL:KKP36954.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="
Inositol monophosphatase n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UR92_SULAO
inositol monophosphatase
IMP_1 (db=PatternScan db_id=PS00629 from=107 to=120 evalue=0.0 interpro_id=IPR020583 interpro_description=Inositol monophosphatase, metal-binding site)
gwf2_scaffold_5981_6
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(5368..7251)
-----------------
DNA (1884bp)
protein (628aa)
Dual specificity protein phosphatase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B6D8_TURPD
dual specificity protein phosphatase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
dual specificity protein phosphatase
seg (db=Seg db_id=seg from=270 to=281)
gwf2_scaffold_5981_7
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(7295..9058)
-----------------
DNA (1764bp)
protein (588aa)
S-layer domain protein, partial n=1 Tax=Paenibacillus elgii B69 RepID=UPI000248C512
S-layer protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
S-layer protein
gb def: Outer membrane protein alpha precursor (db=HMMPanther db_id=PTHR22909:SF9 from=402 to=447 evalue=1.7e-07)
gwf2_scaffold_5981_8
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(9205..10140)
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K9U8_9PROT
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=4 to=15)
gwf2_scaffold_5981_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(10137..10646)
-----------------
DNA (510bp)
protein (170aa)
ThiJ/PfpI domain-containing protein; K05520 protease I [EC:3.2.-.-] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ThiJ/PfpI domain-containing protein n=2 Tax=Thermodesulfobacterium sp. (strain OPB45) RepID=F8C2U9_THESO
ThiJ/PfpI domain-containing protein
THIJ-RELATED (db=HMMPanther db_id=PTHR11019:SF4 from=36 to=168 evalue=1.1e-22)
gwf2_scaffold_5981_10
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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comp(10649..10756)
-----------------
DNA (108bp)
protein (36aa)
id=5095129 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_5981_11
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(10765..11034)
-----------------
DNA (270bp)
protein (90aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Acylphosphatase (Putative) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBK6_9SPHI
acylphosphatase
ACYLPHOSPHATASE_1 (db=PatternScan db_id=PS00150 from=8 to=18 evalue=0.0 interpro_id=IPR017968 interpro_description=Acylphosphatase, conserved site)
gwf2_scaffold_5981_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

11112..11684
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U7W3_CROAH
hypothetical protein; K03748 SanA protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
seg (db=Seg db_id=seg from=10 to=20)
gwf2_scaffold_5981_13
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(11679..12491)
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBL6_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KKP36962.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
hypothetical protein
seg (db=Seg db_id=seg from=115 to=126)
gwf2_scaffold_5981_14
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(12464..12793)
-----------------
DNA (330bp)
protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36963.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
gwf2_scaffold_5981_15
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(12790..13680)
-----------------
DNA (891bp)
protein (297aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=43 to=57)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=100 to=135 evalue=0.0008)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=12 to=130 evalue=2.8e-07)
gwf2_scaffold_5981_16
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(13684..14805)
-----------------
DNA (1122bp)
protein (374aa)
hypothetical protein Saci8_47107 n=1 Tax=Streptomyces acidiscabies 84-104 RepID=UPI000287B229
Uncharacterized protein {ECO:0000313|EMBL:KKP36965.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_5981_17
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(14834..15415)
-----------------
DNA (582bp)
protein (194aa)
Protein of unknown function DUF84 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ITPase-like (db=superfamily db_id=SSF52972 from=1 to=181 evalue=1.4e-12)
(db=HMMPfam db_id=PF01931 from=7 to=161 evalue=6.6e-06 interpro_id=IPR002786 interpro_description=Protein of unknown function DUF84)
gwf2_scaffold_5981_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(15424..15981)
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein n=2 Tax=Emiliania huxleyi CCMP1516 RepID=R1FLV0_EMIHU
NTPase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
inosine/xanthosine triphosphatase
UNCHARACTERIZED (db=HMMPanther db_id=PTHR23276 from=1 to=107 evalue=0.00063)
gwf2_scaffold_5981_19
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(16261..16998)
-----------------
DNA (738bp)
protein (246aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=75 to=86)
gwf2_scaffold_5981_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(17039..17950)
-----------------
DNA (912bp)
protein (304aa)
id=5095139 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_5981_21
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(17973..18146)
-----------------
DNA (174bp)
protein (58aa)
id=5095139 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Displaying 21 items

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