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gwf2_scaffold_6183

Alias: PER_GWF2_33_10_37

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_6183_1
GWB1_OD1_35_20, Nomurabacteria, Parcubacteria, Bacteria

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898..1830
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QSJ5_PERMH
Uncharacterized protein {ECO:0000313|EMBL:KKP72482.1}; TaxID=1618740 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_35_20.;"
hypothetical protein
(db=HMMPfam db_id=PF01936 from=6 to=153 evalue=1.0e-18 interpro_id=IPR021139 interpro_description=NYN domain, limkain-b1-type)
gwf2_scaffold_6183_2
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(1973..2404)
DNA (432bp) protein (144aa)
Death-on-curing family protein n=2 Tax=Acinetobacter baumannii RepID=K5E4A3_ACIBA
Death on curing protein, death on curing protein {ECO:0000313|EMBL:KKP36824.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
death on curing protein
DOC_P1: death-on-curing family protein (db=HMMTigr db_id=TIGR01550 from=9 to=131 evalue=2.1e-10 interpro_id=IPR006440 interpro_description=Addiction module killer protein Doc)
gwf2_scaffold_6183_3
GWB1_OD1_35_20, Nomurabacteria, Parcubacteria, Bacteria

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comp(2404..2658)
DNA (255bp) protein (85aa)
Resolvase related protein {ECO:0000313|EMBL:KKP72484.1}; TaxID=1618740 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_35_20.;"
seg (db=Seg db_id=seg from=25 to=37)
gwf2_scaffold_6183_4
GWA1_OD1_36_15, Nomurabacteria, Parcubacteria, Bacteria

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3065..3430
DNA (366bp) protein (122aa)
Putative membrane protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JX32_SACES
Uncharacterized protein {ECO:0000313|EMBL:KKP98440.1}; TaxID=1618728 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_36_15.;"
hypothetical protein
seg (db=Seg db_id=seg from=51 to=64)
gwf2_scaffold_6183_5
GWB1_OD1_35_20, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4374..4628
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP72486.1}; TaxID=1618740 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_35_20.;"
coiled-coil (db=Coil db_id=coil from=29 to=50 evalue=NA)
seg (db=Seg db_id=seg from=27 to=41)
gwf2_scaffold_6183_6
GWB1_OD1_35_20, Nomurabacteria, Parcubacteria, Bacteria

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comp(4686..5672)
DNA (987bp) protein (329aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP72487.1}; Flags: Fragment;; TaxID=1618740 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_35_20.;"
seg (db=Seg db_id=seg from=53 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=260)
Purple acid phosphatase, N-terminal domain (db=superfamily db_id=SSF49363 from=94 to=180 evalue=3.0e-10 interpro_id=IPR008963 interpro_description=Purple acid phosphatase-like, N-terminal GO=Molecular Function: acid phosphatase activity (GO:0003993), Molecular Function: metal ion binding (GO:0046872))
gwf2_scaffold_6183_7
GWB1_OD1_35_20, Nomurabacteria, Parcubacteria, Bacteria

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comp(5718..7127)
DNA (1410bp) protein (470aa)
Alginate lyase n=3 Tax=Streptomyces RepID=C0KWY1_9ACTO
Alginate lyase {ECO:0000313|EMBL:KKP72304.1}; TaxID=1618740 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_35_20.;"
SCE65.33c; polyguluronate lyase
seg (db=Seg db_id=seg from=6 to=18)
gwf2_scaffold_6183_8
GWA1_OD1_36_15, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7172..8995)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LEL5_TOLAT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP98436.1}; TaxID=1618728 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_36_15.;"
hypothetical protein
seg (db=Seg db_id=seg from=105 to=114)
gwf2_scaffold_6183_9
Parcubacteria bacterium GW2011_GWD2_35_7, Parcubacteria, Bacteria

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comp(9058..11352)
DNA (2295bp) protein (765aa)
Glycosyl transferase family 2 n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J4S4_FRASU rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKP85286.1}; TaxID=1618940 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_35_7.;"
family 2 glycosyl transferase
seg (db=Seg db_id=seg from=2 to=15)
gwf2_scaffold_6183_10
Parcubacteria bacterium GW2011_GWD2_35_7, Parcubacteria, Bacteria

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comp(11417..12109)
DNA (693bp) protein (231aa)
Nucleotide sugar dehydrogenase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDS6_ARCPA
UDP-glucose dehydrogenase (Ugd-2) {ECO:0000313|EMBL:KKP85287.1}; TaxID=1618940 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_35_7.;"
putative UDP-glucose 6-dehydrogenase
(db=HMMPfam db_id=PF00984 from=122 to=219 evalue=1.0e-19 interpro_id=IPR014026 interpro_description=UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: NAD binding (GO:0051287), Biological Process: oxidation-reduction process (GO:0055114))
gwf2_scaffold_6183_11

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comp(12925..13218)
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP75592.1}; TaxID=1618892 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_35_21.;"
gwf2_scaffold_6183_12
Parcubacteria bacterium GW2011_GWD2_35_7, Parcubacteria, Bacteria

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comp(13236..13955)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YCP4_TREAZ
Uncharacterized protein {ECO:0000313|EMBL:KKP85289.1}; TaxID=1618940 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_35_7.;"
hypothetical protein
(db=HMMPfam db_id=PF00376 from=7 to=44 evalue=1.8e-08 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
gwf2_scaffold_6183_13
GWA1_OD1_36_15, Nomurabacteria, Parcubacteria, Bacteria

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comp(14109..14813)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Prevotella buccae ATCC 33574 RepID=E6KA99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP98431.1}; TaxID=1618728 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_36_15.;"
hypothetical protein
(db=HMMPfam db_id=PF08843 from=15 to=165 evalue=1.3e-19 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
gwf2_scaffold_6183_14
GWB1_OD1_35_20, Nomurabacteria, Parcubacteria, Bacteria

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comp(14841..15404)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Prevotella buccae ATCC 33574 RepID=E6KAA0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP72311.1}; TaxID=1618740 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_35_20.;"
hypothetical protein
gwf2_scaffold_6183_15
GWB1_OD1_35_20, Nomurabacteria, Parcubacteria, Bacteria

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comp(15645..16457)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 2303 RepID=B8R913_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP72312.1}; TaxID=1618740 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_35_20.;"
hypothetical protein
seg (db=Seg db_id=seg from=5 to=20)
gwf2_scaffold_6183_16
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(16729..18372)
DNA (1644bp) protein (548aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36838.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
seg (db=Seg db_id=seg from=374 to=387)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
(db=HMMPfam db_id=PF01471 from=459 to=494 evalue=2.5e-06 interpro_id=IPR002477 interpro_description=Peptidoglycan binding-like GO=Biological Process: metabolic process (GO:0008152))
gwf2_scaffold_6183_17
GWC2_OD1_35_35, Nomurabacteria, Parcubacteria, Bacteria

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comp(18721..19560)
DNA (840bp) protein (280aa)
Aminodeoxychorismate lyase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D2B2_HALOH
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KKP78351.1}; TaxID=1618751 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_35_35.;"
aminodeoxychorismate lyase
seg (db=Seg db_id=seg from=3 to=19)
gwf2_scaffold_6183_18
GWA1_OD1_36_15, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19665..19874)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP98426.1}; TaxID=1618728 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_36_15.;"
gwf2_scaffold_6183_19
GWC2_OD1_35_35, Nomurabacteria, Parcubacteria, Bacteria

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comp(20562..22931)
DNA (2370bp) protein (790aa)
Ribonucleoside-triphosphate reductase n=1 Tax=planctomycete KSU-1 RepID=I3IP44_9PLAN rbh
Ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KKP78353.1}; TaxID=1618751 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_35_35.;"
Ribonucleoside-triphosphate reductase
seg (db=Seg db_id=seg from=129 to=144)
gwf2_scaffold_6183_20

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comp(23051..23515)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA2_NITGG
Uncharacterized protein {ECO:0000313|EMBL:KKP75582.1}; TaxID=1618892 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_35_21.;"
hypothetical protein
seg (db=Seg db_id=seg from=6 to=23)
gwf2_scaffold_6183_21
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(23537..24592)
DNA (1056bp) protein (352aa)
Arginine decarboxylase, arginine decarboxylase {ECO:0000313|EMBL:KKP36843.1}; EC=4.1.1.19 {ECO:0000313|EMBL:KKP36843.1};; Flags: Fragment;; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source
Arginine decarboxylase n=1 Tax=planctomycete KSU-1 RepID=I3IJ25_9PLAN
speA; arginine decarboxylase
seg (db=Seg db_id=seg from=68 to=76)
Displaying 21 items

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