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gwc1_scaffold_211

Alias: WS6_GWC1_33_20_2

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_211_1
WS6_GWC1_33_20, WS6, Bacteria

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comp(2..466)
-----------------
DNA (465bp)
protein (155aa)
Glycosyl transferase family 2 n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EI35_9SPIO
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:KKP44498.1}; Flags: Fragment;; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011
glycosyl transferase, group 2 family protein
seg (db=Seg db_id=seg from=42 to=53)
gwc1_scaffold_211_2

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comp(450..1697)
-----------------
DNA (1248bp)
protein (416aa)
Glycosyl transferase family 2 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDR5_ARCPA
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKP54870.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
family 2 glycosyl transferase
(db=HMMPfam db_id=PF00535 from=90 to=221 evalue=1.4e-21 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
gwc1_scaffold_211_3
WS6_GWF1_33_233, WS6, Bacteria

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comp(1703..2434)
-----------------
DNA (732bp)
protein (244aa)
Putative polysaccharide ABC transporter n=1 Tax=Streptococcus suis R61 RepID=G5L0N9_STRSU
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKP44652.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
ATP-binding protein ABC transporter system for polysaccharides
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=150 to=164 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
gwc1_scaffold_211_4

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comp(2436..3209)
-----------------
DNA (774bp)
protein (258aa)
Polysaccharide ABC superfamily ATP binding cassette transporter permease n=1 Tax=Enterococcus italicus DSM 15952 RepID=E6LFG5_9ENTE
Polysaccharide ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:KKP54868.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacter
polysaccharide permease
seg (db=Seg db_id=seg from=112 to=129)
gwc1_scaffold_211_5
GWD1_WS6_35_594, WS6, Bacteria

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comp(3202..4056)
-----------------
DNA (855bp)
protein (285aa)
Glycosyl transferase family 2 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C254_SPHS2
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKP81823.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
family 2 glycosyl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=242 to=264)
gwc1_scaffold_211_6

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4147..5259
-----------------
DNA (1113bp)
protein (371aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C528_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KKP54866.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
seg (db=Seg db_id=seg from=9 to=22)
gwc1_scaffold_211_7
WS6_GWF1_33_233, WS6, Bacteria

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comp(5319..6119)
-----------------
DNA (801bp)
protein (267aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1N9_NITMS
DSBA oxidoreductase {ECO:0000313|EMBL:KKP44648.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
DSBA oxidoreductase
seg (db=Seg db_id=seg from=5 to=27)
gwc1_scaffold_211_8

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6333..7061
-----------------
DNA (729bp)
protein (243aa)
Phospholipase/carboxylesterase family protein {ECO:0000313|EMBL:KKP54864.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=2 to=25)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=119 to=239 evalue=3.2e-11)
ALPHA/BETA HYDROLASE RELATED (db=HMMPanther db_id=PTHR10992 from=47 to=165 evalue=4.0e-05)
gwc1_scaffold_211_9
WS6_GWF1_33_233, WS6, Bacteria

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comp(7038..7421)
-----------------
DNA (384bp)
protein (128aa)
Hit-like protein involved in cell-cycle regulation n=1 Tax=Salimicrobium sp. MJ3 RepID=K2FL56_9BACI
HIT-family protein, Hit-like protein involved in cell-cycle regulation {ECO:0000313|EMBL:KKP44646.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacteriu
histidine triad (HIT) protein
HIT_1 (db=PatternScan db_id=PS00892 from=86 to=104 evalue=0.0 interpro_id=IPR019808 interpro_description=Histidine triad, conserved site)
gwc1_scaffold_211_10

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comp(7426..8016)
-----------------
DNA (591bp)
protein (197aa)
UPI00029B55F0 related cluster n=1 Tax=unknown RepID=UPI00029B55F0
Phosphoesterase (MutT family)-like protein {ECO:0000313|EMBL:KKP54862.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Phosphoesterase MutT/NUDIX family
Nudix (db=superfamily db_id=SSF55811 from=29 to=196 evalue=5.5e-07 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
gwc1_scaffold_211_11

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comp(8020..8223)
-----------------
DNA (204bp)
protein (68aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A0R9_MAHA5
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:KKP54861.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
4Fe-4S ferredoxin
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=10 to=21 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
gwc1_scaffold_211_12

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comp(8366..8746)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54860.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwc1_scaffold_211_13
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(8990..18550)
-----------------
DNA (9561bp)
protein (3187aa)
Putative uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP38_9BACT
hypothetical protein Tax=RIFOXYB1_FULL_WS6_33_15_curated
fibronectin type III domain-containing protein
seg (db=Seg db_id=seg from=128 to=152)
gwc1_scaffold_211_14
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(18698..19174)
-----------------
DNA (477bp)
protein (159aa)
seg Tax=RIFOXYB1_FULL_WS6_33_15_curated
seg (db=Seg db_id=seg from=32 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
gwc1_scaffold_211_15

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comp(19225..19806)
-----------------
DNA (582bp)
protein (194aa)
Metal dependent phosphohydrolase n=5 Tax=Thermotoga RepID=B1LB67_THESQ
Metal dependent phosphohydrolase {ECO:0000313|EMBL:KKP54523.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
metal dependent phosphohydrolase
seg (db=Seg db_id=seg from=147 to=152)
gwc1_scaffold_211_16
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(19818..20810)
-----------------
DNA (993bp)
protein (331aa)
seg Tax=RIFOXYB1_FULL_WS6_33_15_curated
seg (db=Seg db_id=seg from=2 to=16)
gwc1_scaffold_211_17

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20940..22205
-----------------
DNA (1266bp)
protein (422aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PI67_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKP54525.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
gwc1_scaffold_211_18
WS6_GWF1_33_233, WS6, Bacteria

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22255..22827
-----------------
DNA (573bp)
protein (191aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKP44636.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
Transcriptional regulator
coiled-coil (db=Coil db_id=coil from=32 to=53 evalue=NA)
gwc1_scaffold_211_19

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22832..24085
-----------------
DNA (1254bp)
protein (418aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54527.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
gwc1_scaffold_211_20
WS6_GWF1_33_233, WS6, Bacteria

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24082..24591
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44634.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=22 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=38)
gwc1_scaffold_211_21
WS6_GWC1_33_20, WS6, Bacteria

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24588..25475
-----------------
DNA (888bp)
protein (296aa)
tRNA delta(2)-isopentenylpyrophosphate transferase, tRNA dimethylallyltransferase {ECO:0000313|EMBL:KKP44518.1}; EC=2.5.1.75 {ECO:0000313|EMBL:KKP44518.1};; TaxID=1619089 species="Bacteria; candidate
tRNA dimethylallyltransferase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LU05_9FIRM
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=8 to=283 evalue=1.1e-44 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase GO=Biological Process: tRNA processing (GO:0008033))
gwc1_scaffold_211_22
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

comp(25439..26002)
-----------------
DNA (564bp)
protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44519.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
seg (db=Seg db_id=seg from=97 to=109)
LigT-like (db=superfamily db_id=SSF55144 from=1 to=135 evalue=2.3e-10 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070))
gwc1_scaffold_211_23
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(26008..27282)
-----------------
DNA (1275bp)
protein (425aa)
Seryl-tRNA synthetase, seryl-tRNA synthetase {ECO:0000313|EMBL:KKP44631.1}; EC=6.1.1.11 {ECO:0000313|EMBL:KKP44631.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate div
serS2; serine--tRNA ligase 2 (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRU5_9CLOT rbh
seg (db=Seg db_id=seg from=4 to=16)
gwc1_scaffold_211_24
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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27408..28436
-----------------
DNA (1029bp)
protein (343aa)
RecJ-like phosphoesterase n=396 Tax=Staphylococcus aureus RepID=A6QHN8_STAAE
3'-to-5' oligoribonuclease A Tax=RIFOXYB1_FULL_WS6_33_15_curated
3'-to-5' oligoribonuclease A
seg (db=Seg db_id=seg from=203 to=212)
gwc1_scaffold_211_25

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comp(28399..28746)
-----------------
DNA (348bp)
protein (116aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP54533.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=12 to=23)
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
gwc1_scaffold_211_26

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comp(28778..30316)
-----------------
DNA (1539bp)
protein (513aa)
lysyl-tRNA synthetase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C9 rbh
Lysyl-tRNA synthetase {ECO:0000313|EMBL:KKP54534.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=171 to=192 evalue=NA)
gwc1_scaffold_211_27
WS6_GWC1_33_20, WS6, Bacteria

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30471..31553
-----------------
DNA (1083bp)
protein (361aa)
Glycyl-tRNA synthetase, glycyl-tRNA synthetase {ECO:0000313|EMBL:KKP44524.1}; EC=6.1.1.14 {ECO:0000313|EMBL:KKP44524.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate d
Glycyl-tRNA synthetase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMM9_9CHLR rbh
glycine-tRNA synthetase subunit beta
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=22 to=273 evalue=1.3e-64)
gwc1_scaffold_211_28

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comp(31550..32020)
-----------------
DNA (471bp)
protein (157aa)
Transcription elongation factor GreA n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ARM2_9FIRM
Transcription elongation factor GreA {ECO:0000313|EMBL:KKP54622.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transcription elongation factor GreA
coiled-coil (db=Coil db_id=coil from=10 to=38 evalue=NA)
gwc1_scaffold_211_29
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(32089..32766)
-----------------
DNA (678bp)
protein (226aa)
tRNA (Guanine-N(1)-)-methyltransferase, tRNA (Guanine37-N1)-methyltransferase {ECO:0000313|EMBL:KKP46164.1}; EC=2.1.1.228 {ECO:0000313|EMBL:KKP46164.1};; TaxID=1619096 species="Bacteria; candidate div
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Staphylococcus warneri RepID=F3SPN5_STAWA
trmD; tRNA (guanine-N(1)-)-methyltransferase
(db=HMMPfam db_id=PF01746 from=24 to=221 evalue=1.5e-56 interpro_id=IPR016009 interpro_description=tRNA (guanine-N1-)-methyltransferase)
gwc1_scaffold_211_30

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32971..33441
-----------------
DNA (471bp)
protein (157aa)
Transcription elongation factor GreA n=4 Tax=Oribacterium RepID=F5T7R3_9FIRM
Transcription elongation factor GreA {ECO:0000313|EMBL:KKP54624.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=30 to=51 evalue=NA)
Displaying items 1-30 of 87 in total

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