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gwc1_scaffold_817

Alias: WS6_GWC1_33_20_5

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_817_1
WS6_GWC1_33_20, WS6, Bacteria

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2..601
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44178.1}; Flags: Fragment;; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
(db=HMMPfam db_id=PF12389 from=8 to=65 evalue=3.3e-05 interpro_id=IPR022121 interpro_description=Peptidase M73, camelysin)
gwc1_scaffold_817_2
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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662..1222
-----------------
DNA (561bp)
protein (187aa)
sipW; signal peptidase I (EC:3.4.21.89); K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=RIFOXYB1_FULL_WS6_33_15_curated
sipW; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IH40_9CLOT
seg (db=Seg db_id=seg from=2 to=12)
gwc1_scaffold_817_3
GWD1_WS6_35_594, WS6, Bacteria

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1303..1746
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERG2_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:KKP82451.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
hypothetical protein
TIGR00481: Raf kinase inhibitor-like protei (db=HMMTigr db_id=TIGR00481 from=6 to=143 evalue=1.4e-32 interpro_id=IPR005247 interpro_description=YbhB/YbcL)
gwc1_scaffold_817_4

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1826..2740
-----------------
DNA (915bp)
protein (305aa)
Uncharacterized protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GJV7_CALEA
Uncharacterized protein {ECO:0000313|EMBL:KKP55076.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
seg (db=Seg db_id=seg from=5 to=19)
gwc1_scaffold_817_5
WS6_GWF1_33_233, WS6, Bacteria

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comp(2737..4161)
-----------------
DNA (1425bp)
protein (475aa)
Aspartyl/glutamyl-tRNA amidotransferase subunit A, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKP45761.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KKP45761.1};; TaxID=161
Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUF3_9CLOT rbh
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
seg (db=Seg db_id=seg from=149 to=167)
gwc1_scaffold_817_6

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comp(4178..5446)
-----------------
DNA (1269bp)
protein (423aa)
Prolipoprotein diacylglyceryl transferase n=7 Tax=Thermotoga RepID=LGT_THEMA
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:KKP55078.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
diacylglyceryl transferase
seg (db=Seg db_id=seg from=8 to=16)
gwc1_scaffold_817_7
WS6_GWF1_33_233, WS6, Bacteria

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comp(5443..7647)
-----------------
DNA (2205bp)
protein (735aa)
UvrD/Rep helicase family protein, DNA helicase II / ATP-dependent DNA helicase PcrA {ECO:0000313|EMBL:KKP45759.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KKP45759.1};; TaxID=1619096 species="Bacteria; candidat
UvrD/Rep helicase n=4 Tax=Bacillus RepID=C2W8S3_BACCE rbh
uvrD/Rep helicase family protein
coiled-coil (db=Coil db_id=coil from=49 to=77 evalue=NA)
gwc1_scaffold_817_8
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

comp(7795..7905)
-----------------
DNA (111bp)
protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44185.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwc1_scaffold_817_9
WS6_GWF1_33_233, WS6, Bacteria

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8082..8615
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K7G2_THENN
Uncharacterized protein {ECO:0000313|EMBL:KKP45758.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=21)
gwc1_scaffold_817_10
WS6_GWF1_33_233, WS6, Bacteria

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8633..9259
-----------------
DNA (627bp)
protein (209aa)
SNARE associated Golgi protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B3P1_HERA2
Uncharacterized protein {ECO:0000313|EMBL:KKP45757.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
seg (db=Seg db_id=seg from=54 to=66)
gwc1_scaffold_817_11

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comp(9239..10774)
-----------------
DNA (1536bp)
protein (512aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=4 Tax=Pelosinus fermentans RepID=I8RIH2_9FIRM rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000313|EMBL:KKP55082.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GW
seg (db=Seg db_id=seg from=91 to=102)
gwc1_scaffold_817_12
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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10861..11280
-----------------
DNA (420bp)
protein (140aa)
50S ribosomal protein L19 n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YY55_9THEM
50S ribosomal protein L19P; K02884 large subunit ribosomal protein L19 Tax=RIFOXYB1_FULL_WS6_33_15_curated
50S ribosomal protein L19P
rplS_bact: ribosomal protein L19 (db=HMMTigr db_id=TIGR01024 from=3 to=115 evalue=1.3e-38 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwc1_scaffold_817_13

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11405..11953
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55084.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
coiled-coil (db=Coil db_id=coil from=105 to=133 evalue=NA)
gwc1_scaffold_817_14
WS6_GWF1_33_233, WS6, Bacteria

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11954..12265
-----------------
DNA (312bp)
protein (104aa)
Helix-turn-helix domain protein n=2 Tax=Caldicellulosiruptor RepID=E4Q3Y7_CALOW
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:KKP45753.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
helix-turn-helix domain-containing protein
seg (db=Seg db_id=seg from=8 to=19)
gwc1_scaffold_817_15

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comp(12249..12860)
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55086.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=1 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=163 to=185)
gwc1_scaffold_817_16

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comp(12857..13273)
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55087.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=5 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwc1_scaffold_817_17

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comp(13266..15143)
-----------------
DNA (1878bp)
protein (626aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55088.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
(db=HMMPfam db_id=PF01841 from=335 to=429 evalue=1.2e-10 interpro_id=IPR002931 interpro_description=Transglutaminase-like)
gwc1_scaffold_817_18

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comp(15094..15831)
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55089.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
(db=HMMPfam db_id=PF06560 from=56 to=195 evalue=3.1e-15 interpro_id=IPR010551 interpro_description=Glucose-6-phosphate isomerase, prokaryote GO=Molecular Function: glucose-6-phosphate isomerase activity (GO:0004347), Cellular Component: cytoplasm (GO:0005737), Biological Process: gluconeogenesis (GO:0006094), Biological Process: glycolysis (GO:0006096))
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=52 to=198 evalue=4.2e-10 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
gwc1_scaffold_817_19

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comp(15858..16145)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55090.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
(db=HMMPfam db_id=PF02325 from=8 to=85 evalue=4.4e-08 interpro_id=IPR003425 interpro_description=Uncharacterised protein family Ycf19 GO=Cellular Component: membrane (GO:0016020))
gwc1_scaffold_817_20
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(16166..16738)
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45747.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
seg (db=Seg db_id=seg from=10 to=22)
gwc1_scaffold_817_21
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

16935..20330
-----------------
DNA (3396bp)
protein (1132aa)
Polymerase III subunit alpha, DNA polymerase III subunit alpha protein {ECO:0000313|EMBL:KKP44198.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KKP44198.1};; TaxID=1619089 species="Bacteria; candidate division WS6
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R912_THETN rbh
polc: DNA polymerase III, alpha subunit (db=HMMTigr db_id=TIGR00594 from=2 to=1018 evalue=0.0 interpro_id=IPR004805 interpro_description=DNA polymerase III, alpha subunit GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408))
gwc1_scaffold_817_22
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

20344..21825
-----------------
DNA (1482bp)
protein (494aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZ23_PLAL2
Excinuclease ABC subunit C, excinuclease ABC subunit C {ECO:0000313|EMBL:KKP45745.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33
Excinuclease ABC subunit C
seg (db=Seg db_id=seg from=344 to=355)
gwc1_scaffold_817_23
WS6_GWF1_33_233, WS6, Bacteria

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comp(21815..22906)
-----------------
DNA (1092bp)
protein (364aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45744.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=27 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
gwc1_scaffold_817_24
WS6_GWF1_33_233, WS6, Bacteria

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22975..24069
-----------------
DNA (1095bp)
protein (365aa)
K+-dependent Na+/Ca+ exchanger related-protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBI6_9PROT
Na+/Ca+ antiporter, CaCA family, inner membrane protein {ECO:0000313|EMBL:KKP45743.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_3
CaCA family Na(+)/Ca(+) antiporter
seg (db=Seg db_id=seg from=251 to=261)
gwc1_scaffold_817_25
WS6_GWF1_33_233, WS6, Bacteria

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comp(24072..24821)
-----------------
DNA (750bp)
protein (250aa)
Inorganic polyphosphate/ATP-NAD kinase, NAD+ kinase {ECO:0000313|EMBL:KKP45742.1}; EC=2.7.1.23 {ECO:0000313|EMBL:KKP45742.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candid
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Wolbachia sp. subsp. Brugia malayi (strain TRS) RepID=Q5GSN6_WOLTR
POLY(P)/ATP NAD KINASE (db=HMMPanther db_id=PTHR20275 from=6 to=178 evalue=1.7e-06 interpro_id=IPR002504 interpro_description=Inorganic polyphosphate/ATP-NAD kinase, predicted GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
gwc1_scaffold_817_26

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24961..25269
-----------------
DNA (309bp)
protein (103aa)
Dc50, putative n=1 Tax=Ricinus communis RepID=B9SCP7_RICCO
Uncharacterized protein {ECO:0000313|EMBL:KKP55097.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.30.70.330 from=3 to=95 evalue=1.5e-29 interpro_id=IPR012677 interpro_description=Nucleotide-binding, alpha-beta plait GO=Molecular Function: nucleotide binding (GO:0000166))
gwc1_scaffold_817_27
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

comp(25307..26227)
-----------------
DNA (921bp)
protein (307aa)
UvrABC system protein B n=2 Tax=Coprococcus RepID=D5HER2_9FIRM rbh
Excinuclease ABC subunit B, excinuclease ABC subunit B {ECO:0000313|EMBL:KKP44204.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33
excinuclease ABC subunit B
coiled-coil (db=Coil db_id=coil from=76 to=97 evalue=NA)
gwc1_scaffold_817_28
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

comp(26233..27072)
-----------------
DNA (840bp)
protein (280aa)
UvrABC system protein B n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCN2_9PLAN
Excinuclease ABC subunit B, excinuclease ABC subunit B {ECO:0000313|EMBL:KKP44205.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33
excinuclease ABC subunit B
seg (db=Seg db_id=seg from=109 to=121)
gwc1_scaffold_817_29
WS6_GWC1_33_20, WS6, Bacteria

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27123..28916
-----------------
DNA (1794bp)
protein (598aa)
DNA mismatch repair protein MutL n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDH0_DEFDS rbh
Mismatch repair protein MutL, DNA mismatch repair protein MutL protein {ECO:0000313|EMBL:KKP44206.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacteriu
mutL; DNA mismatch repair protein MutL
coiled-coil (db=Coil db_id=coil from=516 to=537 evalue=NA)
gwc1_scaffold_817_30

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28916..29626
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6UG09_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKP55100.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
tetrapyrrole methylase family protein
seg (db=Seg db_id=seg from=149 to=162)
Displaying items 1-30 of 31 in total

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