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gwc1_scaffold_1164

Alias: WS6_GWC1_33_20_9

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_1164_1
WS6_GWF1_33_233, WS6, Bacteria

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comp(673..2514)
-----------------
DNA (1842bp)
protein (614aa)
Thermostable DNA ligase, DNA ligase 1 {ECO:0000313|EMBL:KKP45914.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KKP45914.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS
thermostable DNA ligase (EC:6.5.1.1)
Probable DNA ligase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC2_9BACT rbh
dnl1: DNA ligase I, ATP-dependent (dnl1) (db=HMMTigr db_id=TIGR00574 from=58 to=608 evalue=1.0e-75 interpro_id=IPR000977 interpro_description=DNA ligase, ATP-dependent GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
gwc1_scaffold_1164_2
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(2516..2899)
-----------------
DNA (384bp)
protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45913.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
gwc1_scaffold_1164_3
WS6_GWF1_33_233, WS6, Bacteria

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comp(2926..5619)
-----------------
DNA (2694bp)
protein (898aa)
Polymerase I, DNA polymerase I protein {ECO:0000313|EMBL:KKP45912.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KKP45912.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division W
DNA polymerase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GRN8_CLOLD rbh
DNA polymerase I
coiled-coil (db=Coil db_id=coil from=519 to=540 evalue=NA)
gwc1_scaffold_1164_4
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

comp(5660..7531)
-----------------
DNA (1872bp)
protein (624aa)
ATP-dependent metalloprotease FtsH, cell division protease FtsH {ECO:0000313|EMBL:KKP43903.1}; EC=3.4.24.- {ECO:0000313|EMBL:KKP43903.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" so
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Caloramator australicus RC3 RepID=I7LHU6_9CLOT rbh
ATP-dependent metalloprotease FtsH
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
gwc1_scaffold_1164_5
WS6_GWF1_33_233, WS6, Bacteria

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comp(7666..8226)
-----------------
DNA (561bp)
protein (187aa)
Elongation factor P n=2 Tax=Spirochaeta thermophila RepID=E0RTH9_SPITD
Uncharacterized protein {ECO:0000313|EMBL:KKP45910.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
EFP (db=PatternScan db_id=PS01275 from=150 to=169 evalue=0.0 interpro_id=IPR013852 interpro_description=Translation elongation factor P/YeiP, conserved site)
gwc1_scaffold_1164_6

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8334..8882
-----------------
DNA (549bp)
protein (183aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=4 Tax=Thermoanaerobacterium RepID=D9TRA9_THETC
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KKP55367.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=76 to=85)
gwc1_scaffold_1164_7
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(8996..9451)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45908.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=31 to=50)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
(db=HMMPfam db_id=PF04977 from=40 to=112 evalue=6.0e-09 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
gwc1_scaffold_1164_8
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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9588..10475
-----------------
DNA (888bp)
protein (296aa)
Tyrosine recombinase XerC n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LTM8_TEPAE
xerC; site-specific tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFOXYB1_FULL_WS6_33_15_curated
hypothetical protein
seg (db=Seg db_id=seg from=45 to=55)
gwc1_scaffold_1164_9

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comp(10713..13235)
-----------------
DNA (2523bp)
protein (841aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP55364.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
seg (db=Seg db_id=seg from=315 to=327)
gwc1_scaffold_1164_10

Not on your lists

comp(13304..13612)
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55363.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwc1_scaffold_1164_11

Not on your lists

comp(13624..14067)
-----------------
DNA (444bp)
protein (148aa)
SsrA-binding protein n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=SSRP_SULSY
SsrA-binding protein {ECO:0000313|EMBL:KKP55362.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
smpB; SsrA-binding protein
coiled-coil (db=Coil db_id=coil from=120 to=145 evalue=NA)
gwc1_scaffold_1164_12
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(14082..16379)
-----------------
DNA (2298bp)
protein (766aa)
seg Tax=RIFOXYB1_FULL_WS6_33_15_curated
seg (db=Seg db_id=seg from=213 to=231)
coiled-coil (db=Coil db_id=coil from=76 to=97 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=377)
gwc1_scaffold_1164_13

Not on your lists

comp(16384..16641)
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55360.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=72 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=41)
gwc1_scaffold_1164_14
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(16643..17272)
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45901.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
gwc1_scaffold_1164_15

Not on your lists

comp(17317..19152)
-----------------
DNA (1836bp)
protein (612aa)
Uncharacterized protein n=1 Tax=Mycoplasma sp. G5847 RepID=L5L9L2_9MOLU
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:KKP55358.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacter
SpoIID/LytB protein
seg (db=Seg db_id=seg from=10 to=25)
gwc1_scaffold_1164_16

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comp(19188..19559)
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55357.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
gwc1_scaffold_1164_17

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comp(19561..19833)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein cdivTM_30108 n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00016B2684
Uncharacterized protein {ECO:0000313|EMBL:KKP55356.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
gwc1_scaffold_1164_18

Not on your lists

comp(19879..20241)
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55355.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=37 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwc1_scaffold_1164_19
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(20295..20630)
-----------------
DNA (336bp)
protein (112aa)
seg Tax=RIFOXYB1_FULL_WS6_33_15_curated
seg (db=Seg db_id=seg from=100 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
gwc1_scaffold_1164_20
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(20620..20946)
-----------------
DNA (327bp)
protein (109aa)
seg Tax=RIFOXYB1_FULL_WS6_33_15_curated
seg (db=Seg db_id=seg from=44 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
gwc1_scaffold_1164_21

Not on your lists

comp(20986..21108)
-----------------
DNA (123bp)
protein (41aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55352.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Displaying 21 items

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