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gwc1_scaffold_1238

Alias: WS6_GWC1_33_20_10

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_1238_1

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comp(1..249)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54957.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
gwc1_scaffold_1238_2
WS6_GWF1_33_233, WS6, Bacteria

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329..952
-----------------
DNA (624bp)
protein (208aa)
SNARE associated Golgi protein-like protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9S1_METSL
Uncharacterized protein {ECO:0000313|EMBL:KKP44372.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
putative alkaline phosphatase
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
gwc1_scaffold_1238_3
WS6_GWC1_33_20, WS6, Bacteria

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comp(962..1273)
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP43838.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
gwc1_scaffold_1238_4
WS6_GWC1_33_20, WS6, Bacteria

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comp(1242..1466)
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP43839.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
gwc1_scaffold_1238_5

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comp(1707..2396)
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54960.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=195 to=207)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
(db=HMMPfam db_id=PF00963 from=45 to=165 evalue=4.9e-09 interpro_id=IPR002102 interpro_description=Cellulosome anchoring protein, cohesin domain GO=Biological Process: polysaccharide catabolic process (GO:0000272), Molecular Function: carbohydrate binding (GO:0030246))
gwc1_scaffold_1238_6
WS6_GWF1_33_233, WS6, Bacteria

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2444..3208
-----------------
DNA (765bp)
protein (255aa)
Undecaprenol kinase, undecaprenyl-diphosphatase {ECO:0000313|EMBL:KKP44368.1}; EC=3.6.1.27 {ECO:0000313|EMBL:KKP44368.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate
undecaprenol kinase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VR98_METIM
seg (db=Seg db_id=seg from=242 to=253)
gwc1_scaffold_1238_7
WS6_GWF1_33_233, WS6, Bacteria

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comp(3205..4857)
-----------------
DNA (1653bp)
protein (551aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=GPMI_HALOH
Phosphoglyceromutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000313|EMBL:KKP44367.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division W
(db=HMMPfam db_id=PF01676 from=25 to=543 evalue=1.6e-66 interpro_id=IPR006124 interpro_description=Metalloenzyme GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
gwc1_scaffold_1238_8
WS6_GWC1_33_20, WS6, Bacteria

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4903..5985
-----------------
DNA (1083bp)
protein (361aa)
Peptide chain release factor 2 n=5 Tax=Synechococcus RepID=RF2_SYNPX rbh
Peptide chain release factor 2, peptide chain release factor 2 {ECO:0000313|EMBL:KKP43843.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011
prfB; peptide chain release factor 2
seg (db=Seg db_id=seg from=61 to=68)
gwc1_scaffold_1238_9
WS6_GWF1_33_233, WS6, Bacteria

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6020..6958
-----------------
DNA (939bp)
protein (313aa)
Cell division ATP-binding protein FtsE, cell division transport system ATP-binding protein {ECO:0000313|EMBL:KKP44365.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KKP44365.1};; TaxID=1619096 species="Bacteria; c
Cell division ATP-binding protein FtsE n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDQ4_9LACT
ftsE; cell division ATP-binding protein FtsE
seg (db=Seg db_id=seg from=116 to=127)
gwc1_scaffold_1238_10
WS6_GWF1_33_233, WS6, Bacteria

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6962..7888
-----------------
DNA (927bp)
protein (309aa)
Cell division protein FtsX n=2 Tax=Dialister micraerophilus RepID=E4L8Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKP44364.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
seg (db=Seg db_id=seg from=228 to=238)
gwc1_scaffold_1238_11

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7892..9211
-----------------
DNA (1320bp)
protein (440aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKP54966.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Membrane-bound metallopeptidase
seg (db=Seg db_id=seg from=45 to=54)
gwc1_scaffold_1238_12
WS6_GWF1_33_233, WS6, Bacteria

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9291..10157
-----------------
DNA (867bp)
protein (289aa)
Foldase foldase protein PrsA {ECO:0000313|EMBL:KKP44362.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KKP44362.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacteri
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J1X8_9BACL
peptidylprolyl isomerase
seg (db=Seg db_id=seg from=28 to=51)
gwc1_scaffold_1238_13
GWD1_WS6_35_594, WS6, Bacteria

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comp(10206..10802)
-----------------
DNA (597bp)
protein (199aa)
Uncharacterized protein n=1 Tax=Prunus persica RepID=M5X1N6_PRUPE
Chloroplast-specific ribosomal protein {ECO:0000313|EMBL:KKP81625.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
SSU ribosomal protein S30P,sigma 54 modulation protein
no description (db=Gene3D db_id=G3DSA:3.30.160.100 from=4 to=116 evalue=1.8e-14 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
gwc1_scaffold_1238_14

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10954..11418
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54969.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwc1_scaffold_1238_15

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comp(11534..12406)
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54970.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwc1_scaffold_1238_16

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12553..12876
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54971.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=88 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwc1_scaffold_1238_17

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12933..13334
-----------------
DNA (402bp)
protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54972.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwc1_scaffold_1238_18

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13420..13902
-----------------
DNA (483bp)
protein (161aa)
Flavodoxin n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F7J7_THELT
Flavodoxin {ECO:0000313|EMBL:KKP54973.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
flavodoxin
FLAVODOXIN (db=PatternScan db_id=PS00201 from=5 to=21 evalue=0.0 interpro_id=IPR001226 interpro_description=Flavodoxin, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: FMN binding (GO:0010181))
gwc1_scaffold_1238_19
WS6_GWF1_33_233, WS6, Bacteria

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13916..14302
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44355.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=12 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
(db=HMMPfam db_id=PF00717 from=46 to=114 evalue=1.8e-05 interpro_id=IPR019759 interpro_description=Peptidase S24/S26A/S26B)
gwc1_scaffold_1238_20
WS6_GWF1_33_233, WS6, Bacteria

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comp(14288..15100)
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44354.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=20 to=270 evalue=1.4e-19)
(db=HMMPfam db_id=PF01048 from=93 to=201 evalue=5.5e-18 interpro_id=IPR000845 interpro_description=Nucleoside phosphorylase domain GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: nucleoside metabolic process (GO:0009116))
no description (db=Gene3D db_id=G3DSA:3.40.50.1580 from=82 to=262 evalue=7.0e-11)
gwc1_scaffold_1238_21
WS6_GWC1_33_20, WS6, Bacteria

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15168..16424
-----------------
DNA (1257bp)
protein (419aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP43856.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
seg (db=Seg db_id=seg from=11 to=22)
gwc1_scaffold_1238_22
WS6_GWC1_33_20, WS6, Bacteria

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16552..18360
-----------------
DNA (1809bp)
protein (603aa)
Ig domain protein, group 1 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020K9_SOLUE
Ig domain-containing protein {ECO:0000313|EMBL:KKP43857.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
Ig domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
gwc1_scaffold_1238_23
WS6_GWF1_33_233, WS6, Bacteria

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18543..19058
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44351.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwc1_scaffold_1238_24
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

19129..19440
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44350.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=4 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
gwc1_scaffold_1238_25
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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19437..19547
-----------------
DNA (111bp)
protein (37aa)
seg Tax=RIFOXYB1_FULL_WS6_33_15_curated
seg (db=Seg db_id=seg from=12 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
gwc1_scaffold_1238_26
WS6_GWC1_33_20, WS6, Bacteria

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19612..21378
-----------------
DNA (1767bp)
protein (589aa)
Small GTP-binding protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT16_9BACT rbh
GTP-binding protein TypA, GTP-binding protein {ECO:0000313|EMBL:KKP43861.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
GTP-binding protein TypA
seg (db=Seg db_id=seg from=344 to=356)
gwc1_scaffold_1238_27
WS6_GWC1_33_20, WS6, Bacteria

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21411..22079
-----------------
DNA (669bp)
protein (223aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKP43862.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
seg (db=Seg db_id=seg from=42 to=47)
gwc1_scaffold_1238_28
WS6_GWF1_33_233, WS6, Bacteria

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22063..23352
-----------------
DNA (1290bp)
protein (430aa)
permease n=1 Tax=Clostridium arbusti SL206 RepID=UPI000288F17F
Uncharacterized protein {ECO:0000313|EMBL:KKP44346.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
seg (db=Seg db_id=seg from=348 to=358)
gwc1_scaffold_1238_29
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(23353..23805)
-----------------
DNA (453bp)
protein (151aa)
id=5100078 Tax=RIFOXYB1_FULL_WS6_33_15_curated
gwc1_scaffold_1238_30

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24177..24551
-----------------
DNA (375bp)
protein (125aa)
Desulfoferrodoxin n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VW68_DESAS
Desulfoferrodoxin {ECO:0000313|EMBL:KKP54421.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
desulfoferrodoxin
Superoxide reductase-like (db=superfamily db_id=SSF49367 from=36 to=124 evalue=1.5e-27 interpro_id=IPR002742 interpro_description=Desulfoferrodoxin, ferrous iron-binding domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
Displaying items 1-30 of 42 in total

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