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gwc1_scaffold_2368

Alias: WS6_GWC1_33_20_13

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_2368_1

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2..112
-----------------
DNA (111bp)
protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54365.1}; Flags: Fragment;; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
(db=HMMPfam db_id=PF02833 from=4 to=31 evalue=3.3e-05 interpro_id=IPR004097 interpro_description=DHHA2 GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: pyrophosphatase activity (GO:0016462))
gwc1_scaffold_2368_2
WS6_GWC1_33_20, WS6, Bacteria

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comp(173..592)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP43567.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
gwc1_scaffold_2368_3
WS6_GWC1_33_20, WS6, Bacteria

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comp(749..1342)
-----------------
DNA (594bp)
protein (198aa)
Methionine aminopeptidase, type I, methionyl aminopeptidase {ECO:0000313|EMBL:KKP43568.1}; EC=3.4.11.18 {ECO:0000313|EMBL:KKP43568.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" sourc
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Thermodesulfobacterium sp. (strain OPB45) RepID=F8C5A5_THESO
(db=HMMPfam db_id=PF00557 from=11 to=184 evalue=3.9e-32 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
gwc1_scaffold_2368_4
WS6_GWC1_33_20, WS6, Bacteria

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comp(1388..2551)
-----------------
DNA (1164bp)
protein (388aa)
Exodeoxyribonuclease V n=5 Tax=Bartonella RepID=E6Z015_BARSR
Uncharacterized protein {ECO:0000313|EMBL:KKP43569.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
hypothetical protein
DNA2/NAM7 HELICASE FAMILY (db=HMMPanther db_id=PTHR10887 from=106 to=157 evalue=0.00043)
gwc1_scaffold_2368_5
WS6_GWF1_33_233, WS6, Bacteria

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2585..4018
-----------------
DNA (1434bp)
protein (478aa)
Cytochrome c biogenesis protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QAN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKP45588.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
Cytochrome c biogenesis protein
seg (db=Seg db_id=seg from=12 to=19)
gwc1_scaffold_2368_6
WS6_GWF1_33_233, WS6, Bacteria

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comp(4020..4517)
-----------------
DNA (498bp)
protein (166aa)
FKBP-type peptidyl-prolyl cis-trans isomerase, peptidylprolyl isomerase {ECO:0000313|EMBL:KKP45589.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KKP45589.1};; TaxID=1619096 species="Bacteria; candidate division WS
Peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FAW8_9RHOB
seg (db=Seg db_id=seg from=117 to=130)
gwc1_scaffold_2368_7
WS6_GWF1_33_233, WS6, Bacteria

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4640..5077
-----------------
DNA (438bp)
protein (146aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MK03_9CLOT
MarR family transcriptional regulator {ECO:0000313|EMBL:KKP45590.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transcriptional regulator, MarR family
HTHMARR (db=FPrintScan db_id=PR00598 from=45 to=61 evalue=1.5e-07 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
gwc1_scaffold_2368_8

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5077..5856
-----------------
DNA (780bp)
protein (260aa)
DNA polymerase III, epsilon subunit n=3 Tax=Arcobacter butzleri RepID=A8EU91_ARCB4
Exonuclease {ECO:0000313|EMBL:KKP54358.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
exonuclease
seg (db=Seg db_id=seg from=107 to=121)
gwc1_scaffold_2368_9
GWD1_WS6_35_594, WS6, Bacteria

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comp(5809..6816)
-----------------
DNA (1008bp)
protein (336aa)
GTPase obg n=2 Tax=Pelagibacter ubique RepID=OBG_PELUB
GTPase obg {ECO:0000313|EMBL:KKP82146.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
obg; Spo0B-associated GTP-binding protein
seg (db=Seg db_id=seg from=39 to=46)
gwc1_scaffold_2368_10

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6897..8603
-----------------
DNA (1707bp)
protein (569aa)
2-oxoacid oxidoreductase, gamma-alpha subunit n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PCG0_DEFDS rbh
2-oxoacid oxidoreductase, gamma-alpha subunit {ECO:0000313|EMBL:KKP54356.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
seg (db=Seg db_id=seg from=448 to=459)
gwc1_scaffold_2368_11
GWD1_WS6_35_594, WS6, Bacteria

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8600..9451
-----------------
DNA (852bp)
protein (284aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase,beta subunit n=1 Tax=Clostridium ultunense Esp RepID=M1ZHY7_9CLOT
2-oxoacid ferredoxin oxidoreductase, subunit beta {ECO:0000313|EMBL:KKP82148.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.
2-oxoglutarate ferredoxin oxidoreductase subunit beta
THIAMINE PYROPHOSPHATE ENZYMES (db=HMMPanther db_id=PTHR18968 from=69 to=238 evalue=0.00072)
gwc1_scaffold_2368_12
WS6_GWF1_33_233, WS6, Bacteria

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9453..11558
-----------------
DNA (2106bp)
protein (702aa)
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein n=1 Tax=Thermodesulfobacterium sp. (strain OPB45) RepID=F8C4V1_THESO rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP45595.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
acetyl coenzyme A synthetase alpha domain-containing protein
seg (db=Seg db_id=seg from=78 to=90)
gwc1_scaffold_2368_13
WS6_GWF1_33_233, WS6, Bacteria

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comp(11565..13226)
-----------------
DNA (1662bp)
protein (554aa)
CTP synthase, CTP synthase {ECO:0000313|EMBL:KKP45596.1}; EC=6.3.4.2 {ECO:0000313|EMBL:KKP45596.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium
CTP synthase (EC:6.3.4.2)
CTP synthetase n=1 Tax=sediment metagenome RepID=D9PIM0_9ZZZZ rbh
seg (db=Seg db_id=seg from=5 to=27)
gwc1_scaffold_2368_14
WS6_GWF1_33_233, WS6, Bacteria

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comp(13285..13725)
-----------------
DNA (441bp)
protein (147aa)
Cytosine/adenosine deaminase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LTR8_CLOCD
Cytosine/adenosine deaminase {ECO:0000313|EMBL:KKP45597.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
cytosine/adenosine deaminase
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=51 to=88 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
gwc1_scaffold_2368_15

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13764..14066
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54350.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Displaying 15 items

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