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gwc1_scaffold_4046

Alias: WS6_GWC1_33_20_17

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_4046_1
WS6_GWC1_33_20, WS6, Bacteria

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1..5859
-----------------
DNA (5859bp)
protein (1953aa)
Possible T4-like proximal tail fiber n=1 Tax=uncultured phage MedDCM-OCT-S09-C5 RepID=D6PIN1_9VIRU rbh
Outer membrane protein {ECO:0000313|EMBL:KKP43428.1}; Flags: Fragment;; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
outer membrane protein
seg (db=Seg db_id=seg from=21 to=40)
gwc1_scaffold_4046_2
WS6_GWC1_33_20, WS6, Bacteria

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5865..8756
-----------------
DNA (2892bp)
protein (964aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP43429.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
seg (db=Seg db_id=seg from=17 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Concanavalin A-like lectins/glucanases (db=superfamily db_id=SSF49899 from=394 to=535 evalue=2.1e-05 interpro_id=IPR008985 interpro_description=Concanavalin A-like lectin/glucanase)
gwc1_scaffold_4046_3
WS6_GWC1_33_20, WS6, Bacteria

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8774..9394
-----------------
DNA (621bp)
protein (207aa)
Peptidyl-prolyl isomerase {ECO:0000313|EMBL:KKP43430.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KKP43430.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium
peptidyl-prolyl isomerase (EC:5.2.1.8)
cyclophilin type peptidyl-prolyl cis-trans isomerase n=1 Tax=Dietzia alimentaria 72 RepID=UPI00029A161E
seg (db=Seg db_id=seg from=14 to=28)
gwc1_scaffold_4046_4
GWD1_WS6_35_594, WS6, Bacteria

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9453..9650
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP81906.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=27)
Displaying 4 items

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