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gwc1_scaffold_4328

Alias: WS6_GWC1_33_20_18

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_4328_1
WS6_GWF1_33_233, WS6, Bacteria

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comp(1..684)
-----------------
DNA (684bp)
protein (228aa)
NtrC family signal transduction histidine kinase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGY7_IGNAJ
NtrC family signal transduction histidine kinase {ECO:0000313|EMBL:KKP45599.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;
NtrC family signal transduction histidine kinase
Fe-only hydrogenase (db=superfamily db_id=SSF53920 from=7 to=228 evalue=1.2e-44 interpro_id=IPR009016 interpro_description=Iron hydrogenase)
gwc1_scaffold_4328_2

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729..1253
-----------------
DNA (525bp)
protein (175aa)
Putative Fe-only hydrogenase n=1 Tax=uncultured archaeon RepID=D1JG51_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKP54348.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
gwc1_scaffold_4328_3

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1272..1946
-----------------
DNA (675bp)
protein (225aa)
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKP54347.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
putative neutral zinc metallopeptidase
seg (db=Seg db_id=seg from=2 to=21)
gwc1_scaffold_4328_4
WS6_GWC1_33_20, WS6, Bacteria

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2144..3913
-----------------
DNA (1770bp)
protein (590aa)
Glucosamine-fructose-6-phosphate aminotransferase, glucosamine-fructose-6-phosphate aminotransferase (Isomerizing) {ECO:0000313|EMBL:KKP43349.1}; EC=2.6.1.16 {ECO:0000313|EMBL:KKP43349.1};; TaxID=1619
glucosamine-fructose-6-phosphate aminotransferase isomerizing (EC:2.6.1.16)
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=2 Tax=Nitrosopumilaceae RepID=A9A435_NITMS rbh
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR10937 from=2 to=589 evalue=2.2e-168)
gwc1_scaffold_4328_5

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comp(3914..4624)
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54345.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwc1_scaffold_4328_6
WS6_GWC1_33_20, WS6, Bacteria

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comp(4644..6377)
-----------------
DNA (1734bp)
protein (578aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF46_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:KKP43351.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
hypothetical protein
seg (db=Seg db_id=seg from=6 to=15)
gwc1_scaffold_4328_7
WS6_GWC1_33_20, WS6, Bacteria

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comp(6389..6934)
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHB7_ACEWD
Uncharacterized protein {ECO:0000313|EMBL:KKP43352.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
hypothetical protein
seg (db=Seg db_id=seg from=6 to=19)
gwc1_scaffold_4328_8
WS6_GWF1_33_233, WS6, Bacteria

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comp(6997..7452)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45606.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
gwc1_scaffold_4328_9
WS6_GWF1_33_233, WS6, Bacteria

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comp(7538..8200)
-----------------
DNA (663bp)
protein (221aa)
Delta-6 fatty acid desaturase (Fragment) n=1 Tax=Ceratodon purpureus RepID=A7UFH1_CERPU
Delta-6 fatty acid desaturase {ECO:0000313|EMBL:KKP45607.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=93 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=111 to=133)
gwc1_scaffold_4328_10
WS6_GWC1_33_20, WS6, Bacteria

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comp(8217..8930)
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CFS2_9CLOT
Alkylation repair protein {ECO:0000313|EMBL:KKP43355.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
DNA alkylation repair protein
seg (db=Seg db_id=seg from=15 to=28)
gwc1_scaffold_4328_11
WS6_GWC1_33_20, WS6, Bacteria

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8965..9234
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP43356.1}; Flags: Fragment;; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
(db=HMMPfam db_id=PF00675 from=27 to=83 evalue=1.7e-06 interpro_id=IPR011765 interpro_description=Peptidase M16, N-terminal GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
no description (db=Gene3D db_id=G3DSA:3.30.830.10 from=15 to=86 evalue=2.0e-07 interpro_id=IPR011237 interpro_description=Peptidase M16, core GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
LuxS/MPP-like metallohydrolase (db=superfamily db_id=SSF63411 from=11 to=86 evalue=5.7e-09 interpro_id=IPR011249 interpro_description=Metalloenzyme, LuxS/M16 peptidase-like, metal-binding GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
Displaying 11 items

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