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gwc1_scaffold_6793

Alias: WS6_GWC1_33_20_22

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_6793_1
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(45..1568)
-----------------
DNA (1524bp)
protein (508aa)
Site-specific recombinase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LV20_SYNAS
site-specific recombinase Tax=RIFOXYB1_FULL_WS6_33_15_curated
site-specific recombinase
seg (db=Seg db_id=seg from=303 to=314)
gwc1_scaffold_6793_2
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(1836..2219)
-----------------
DNA (384bp)
protein (128aa)
Uncharacterized protein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KDB5_ELUMP
hypothetical protein Tax=RIFOXYB1_FULL_WS6_33_15_curated
hypothetical protein
gwc1_scaffold_6793_3
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(2203..3567)
-----------------
DNA (1365bp)
protein (455aa)
DNA mismatch repair enzyme MutH n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TKK6_CLOBB rbh
DNA mismatch repair protein MutH; K03573 DNA mismatch repair protein MutH Tax=RIFOXYB1_FULL_WS6_33_15_curated
DNA mismatch repair protein MutH
no description (db=Gene3D db_id=G3DSA:3.40.600.10 from=10 to=232 evalue=0.00032 interpro_id=IPR011337 interpro_description=DNA mismatch repair MutH/Restriction endonuclease, type II GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519))
gwc1_scaffold_6793_4
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(3554..4840)
-----------------
DNA (1287bp)
protein (429aa)
Cytosine-specific methyltransferase n=1 Tax=Prevotella salivae DSM 15606 RepID=E6MQC5_9BACT rbh
DNA-methyltransferase Dcm Tax=RIFOXYB1_FULL_WS6_33_15_curated
DNA-methyltransferase Dcm
C5_MTASE_1 (db=PatternScan db_id=PS00094 from=81 to=93 evalue=0.0 interpro_id=IPR018117 interpro_description=DNA methylase, C-5 cytosine-specific, active site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA methylation (GO:0006306))
gwc1_scaffold_6793_5
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(4929..5366)
-----------------
DNA (438bp)
protein (146aa)
transmembrane_regions Tax=RIFOXYB1_FULL_WS6_33_15_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=33)
gwc1_scaffold_6793_6
WS6_GWC1_33_20, WS6, Bacteria

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comp(5441..6364)
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZJM2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKP42979.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
hypothetical protein
seg (db=Seg db_id=seg from=214 to=225)
gwc1_scaffold_6793_7

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comp(6369..6548)
-----------------
DNA (180bp)
protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55072.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=38 to=59)
Displaying 7 items

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