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gwe1_scaffold_1618

Alias: GWE1_WS6_33_547_20

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe1_scaffold_1618_1
GWD1_WS6_35_594, WS6, Bacteria

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3..1148
DNA (1146bp) protein (382aa)
lysyl-tRNA synthetase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C9 rbh
Lysyl-tRNA synthetase {ECO:0000313|EMBL:KKP82561.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=40 to=61 evalue=NA)
gwe1_scaffold_1618_2

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1180..1527
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP54533.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
seg (db=Seg db_id=seg from=12 to=23)
gwe1_scaffold_1618_3
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(1490..2518)
DNA (1029bp) protein (343aa)
RecJ-like phosphoesterase n=396 Tax=Staphylococcus aureus RepID=A6QHN8_STAAE
3'-to-5' oligoribonuclease A Tax=RIFOXYB1_FULL_WS6_33_15_curated
3'-to-5' oligoribonuclease A
seg (db=Seg db_id=seg from=203 to=212)
gwe1_scaffold_1618_4
WS6_GWF1_33_233, WS6, Bacteria

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2644..3918
DNA (1275bp) protein (425aa)
Seryl-tRNA synthetase, seryl-tRNA synthetase {ECO:0000313|EMBL:KKP44631.1}; EC=6.1.1.11 {ECO:0000313|EMBL:KKP44631.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate div
serS2; serine--tRNA ligase 2 (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRU5_9CLOT rbh
coiled-coil (db=Coil db_id=coil from=70 to=105 evalue=NA)
gwe1_scaffold_1618_5
WS6_GWF1_33_233, WS6, Bacteria

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3924..4487
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44632.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
LigT-like (db=superfamily db_id=SSF55144 from=1 to=135 evalue=2.8e-10 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070))
gwe1_scaffold_1618_6
WS6_GWF1_33_233, WS6, Bacteria

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comp(4451..4852)
DNA (402bp) protein (134aa)
tRNA delta(2)-isopentenylpyrophosphate transferase, tRNA dimethylallyltransferase {ECO:0000313|EMBL:KKP44633.1}; EC=2.5.1.75 {ECO:0000313|EMBL:KKP44633.1};; TaxID=1619096 species="Bacteria; candidate
tRNA dimethylallyltransferase n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LU05_9FIRM
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE (db=HMMPanther db_id=PTHR11088:SF21 from=23 to=124 evalue=3.6e-16)
gwe1_scaffold_1618_7
WS6_GWC1_33_20, WS6, Bacteria

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comp(4954..5301)
DNA (348bp) protein (116aa)
tRNA delta(2)-isopentenylpyrophosphate transferase, tRNA dimethylallyltransferase {ECO:0000313|EMBL:KKP44518.1}; EC=2.5.1.75 {ECO:0000313|EMBL:KKP44518.1};; TaxID=1619089 species="Bacteria; candidate
tRNA dimethylallyltransferase n=2 Tax=Cyanothece RepID=MIAA_CYAA5
miaA; tRNA delta-2-isopentenylpyrophosphate transferase
(db=HMMPfam db_id=PF01715 from=41 to=114 evalue=1.4e-14 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
gwe1_scaffold_1618_8
WS6_GWF1_33_233, WS6, Bacteria

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comp(5298..5807)
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44634.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=38)
seg (db=Seg db_id=seg from=22 to=36)
gwe1_scaffold_1618_9

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comp(5804..7057)
DNA (1254bp) protein (418aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54527.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=20 to=42)
gwe1_scaffold_1618_10
WS6_GWF1_33_233, WS6, Bacteria

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comp(7062..7634)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKP44636.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
Transcriptional regulator
coiled-coil (db=Coil db_id=coil from=32 to=53 evalue=NA)
gwe1_scaffold_1618_11

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comp(7684..8949)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PI67_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKP54525.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
gwe1_scaffold_1618_12
WS6_GWF1_33_233, WS6, Bacteria

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9079..10071
DNA (993bp) protein (331aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44638.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=2 to=16)
gwe1_scaffold_1618_13

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10083..10664
DNA (582bp) protein (194aa)
Metal dependent phosphohydrolase n=5 Tax=Thermotoga RepID=B1LB67_THESQ
Metal dependent phosphohydrolase {ECO:0000313|EMBL:KKP54523.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
metal dependent phosphohydrolase
(db=HMMPfam db_id=PF01966 from=23 to=101 evalue=0.00012 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
gwe1_scaffold_1618_14
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

10715..11191
DNA (477bp) protein (159aa)
seg Tax=RIFOXYB1_FULL_WS6_33_15_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
seg (db=Seg db_id=seg from=32 to=53)
gwe1_scaffold_1618_15
WS6_GWF1_33_233, WS6, Bacteria

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11303..15478
DNA (4176bp) protein (1392aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FIE2_DESAA
Uncharacterized protein {ECO:0000313|EMBL:KKP44641.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
gwe1_scaffold_1618_16

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15417..16484
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP38_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP54858.1}; Flags: Fragment;; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
similar to predicted protein
seg (db=Seg db_id=seg from=73 to=91)
gwe1_scaffold_1618_17
WS6_GWC1_33_20, WS6, Bacteria

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16423..17577
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FIE2_DESAA
Uncharacterized protein {ECO:0000313|EMBL:KKP44510.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
putative lipoprotein
seg (db=Seg db_id=seg from=19 to=34)
gwe1_scaffold_1618_18

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17709..20942
DNA (3234bp) protein (1078aa)
Putative uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP38_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP54859.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=778 to=800)
gwe1_scaffold_1618_19

Not on your lists

21186..21566
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54860.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwe1_scaffold_1618_20

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21709..21912
DNA (204bp) protein (68aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A0R9_MAHA5
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:KKP54861.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
4Fe-4S ferredoxin
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=10 to=21 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
gwe1_scaffold_1618_21

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21916..22506
DNA (591bp) protein (197aa)
UPI00029B55F0 related cluster n=1 Tax=unknown RepID=UPI00029B55F0
Phosphoesterase (MutT family)-like protein {ECO:0000313|EMBL:KKP54862.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Phosphoesterase MutT/NUDIX family
Nudix (db=superfamily db_id=SSF55811 from=29 to=196 evalue=5.5e-07 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
gwe1_scaffold_1618_22
WS6_GWF1_33_233, WS6, Bacteria

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22511..22894
DNA (384bp) protein (128aa)
Hit-like protein involved in cell-cycle regulation n=1 Tax=Salimicrobium sp. MJ3 RepID=K2FL56_9BACI
HIT-family protein, Hit-like protein involved in cell-cycle regulation {ECO:0000313|EMBL:KKP44646.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacteriu
histidine triad (HIT) protein
HIT_1 (db=PatternScan db_id=PS00892 from=86 to=104 evalue=0.0 interpro_id=IPR019808 interpro_description=Histidine triad, conserved site)
gwe1_scaffold_1618_23

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comp(22871..23422)
DNA (552bp) protein (184aa)
Phospholipase/carboxylesterase family protein {ECO:0000313|EMBL:KKP54864.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=101 to=117)
PHOSPHOLIPASE-RELATED (db=HMMPanther db_id=PTHR11614 from=54 to=105 evalue=0.00067)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=60 to=180 evalue=3.2e-11)
Displaying 23 items

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