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This organism can only be binned in the context of its binning project GWA1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwd1_scaffold_1600

Alias: GWD1_Treponema_61_31_157

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwd1_scaffold_1600_1
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

24..1004
-----------------
DNA (981bp)
protein (327aa)
gap; Glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12) Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Glyceraldehyde 3-phosphate dehydrogenase
gwd1_scaffold_1600_2
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

1029..2015
-----------------
DNA (987bp)
protein (329aa)
pgk; phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Phosphoglycerate kinase
gwd1_scaffold_1600_3
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

2066..2266
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02408.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_1600_4
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

2266..3108
-----------------
DNA (843bp)
protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02407.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_1600_5
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

3105..3755
-----------------
DNA (651bp)
protein (217aa)
Triosephosphate isomerase {ECO:0000313|EMBL:KKS02406.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
Triosephosphate isomerase
Triosephosphate isomerase
gwd1_scaffold_1600_6
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

3706..4914
-----------------
DNA (1209bp)
protein (403aa)
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:KKS02405.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator
gwd1_scaffold_1600_7
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

4914..5618
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02404.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_1600_8
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

5618..6349
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02403.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_1600_9
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(6352..6840)
-----------------
DNA (489bp)
protein (163aa)
transmembrane_regions 13..32 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_1600_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(6903..7460)
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_1600_11
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(7457..8053)
-----------------
DNA (597bp)
protein (199aa)
transmembrane_regions 54..76 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_1600_12
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


comp(7995..8312)
-----------------
DNA (318bp)
protein (106aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
30S ribosomal protein S20
gwd1_scaffold_1600_13
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

8354..10003
-----------------
DNA (1650bp)
protein (550aa)
integral membrane protein MviN; K03980 virulence factor Tax=RIFOXYC1_FULL_WWE3_42_17_curated
putative peptidoglycan lipid II flippase MurJ
Proposed peptidoglycan lipid II flippase MurJ
gwd1_scaffold_1600_14
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

10030..11823
-----------------
DNA (1794bp)
protein (598aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Elongation factor 4
gwd1_scaffold_1600_15
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

11892..12614
-----------------
DNA (723bp)
protein (241aa)
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor Tax=RIFOXYC1_FULL_WWE3_42_17_curated
Heat-inducible transcription repressor hrcA
Heat-inducible transcription repressor hrcA
gwd1_scaffold_1600_16
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

12636..13088
-----------------
DNA (453bp)
protein (151aa)
Protein GrpE {ECO:0000313|EMBL:KKS02395.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
Protein GrpE
Protein GrpE
gwd1_scaffold_1600_17
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

13199..14899
-----------------
DNA (1701bp)
protein (567aa)
chaperone protein DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Chaperone protein DnaK
gwd1_scaffold_1600_18
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

14985..15251
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02881.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_1600_19
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

15253..15564
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Uncharacterized protein
gwd1_scaffold_1600_20
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

15625..15921
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_1600_21
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

15908..18352
-----------------
DNA (2445bp)
protein (815aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02878.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Putative uncharacterized protein
gwd1_scaffold_1600_22
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

18377..19585
-----------------
DNA (1209bp)
protein (403aa)
Actin-like ATPase involved in cell division-like protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
cell division protein septum formation
cell division protein (septum formation)
gwd1_scaffold_1600_23
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

19601..21112
-----------------
DNA (1512bp)
protein (504aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_1600_24
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

21105..21545
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02875.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Putative Holliday junction resolvase
gwd1_scaffold_1600_25
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

21612..22583
-----------------
DNA (972bp)
protein (324aa)
HAD family hydrolase Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3
gwd1_scaffold_1600_26
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(22567..22791)
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_1600_27
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

23035..23256
-----------------
DNA (222bp)
protein (74aa)
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KKS02873.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Displaying 27 items

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