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This organism can only be binned in the context of its binning project GWC2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwd1_scaffold_2690

Alias: GWD1_Treponema_61_31_162

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwd1_scaffold_2690_1
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(2..277)
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03155.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
gwd1_scaffold_2690_2
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(739..1056)
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03156.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_2690_3
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(1155..1661)
-----------------
DNA (507bp)
protein (169aa)
id=5084343 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
Beta-lactamase domain protein
gwd1_scaffold_2690_4
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

1836..2162
-----------------
DNA (327bp)
protein (109aa)
Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwd1_scaffold_2690_5
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

2347..2874
-----------------
DNA (528bp)
protein (176aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
exonuclease
DNA polymerase III epsilon subunit
gwd1_scaffold_2690_6
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

2887..4056
-----------------
DNA (1170bp)
protein (390aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwd1_scaffold_2690_7
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(4172..4654)
-----------------
DNA (483bp)
protein (161aa)
Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwd1_scaffold_2690_8
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(4762..7251)
-----------------
DNA (2490bp)
protein (830aa)
Cation transport ATPase {ECO:0000313|EMBL:KKS03162.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Cation transport ATPase
gwd1_scaffold_2690_9
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(7342..7683)
-----------------
DNA (342bp)
protein (114aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwd1_scaffold_2690_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(7680..7895)
-----------------
DNA (216bp)
protein (72aa)
source missing description 1..65 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_2690_11
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

7917..8441
-----------------
DNA (525bp)
protein (175aa)
NADH ubiquinone oxidoreductase 20 kDa subunit {ECO:0000313|EMBL:KKS03165.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
NADH ubiquinone oxidoreductase 20 kDa subunit
NADH ubiquinone oxidoreductase 20 kDa subunit
gwd1_scaffold_2690_12
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

8434..9735
-----------------
DNA (1302bp)
protein (434aa)
Nickel-dependent hydrogenase {ECO:0000313|EMBL:KKS03166.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
nickel-dependent hydrogenase
Nickel-dependent hydrogenase
gwd1_scaffold_2690_13
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(9675..10076)
-----------------
DNA (402bp)
protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03167.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_2690_14
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

10307..10729
-----------------
DNA (423bp)
protein (141aa)
seg 116..138 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_2690_15
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(10772..11110)
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_2690_16
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(11200..12087)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Putative uncharacterized protein
gwd1_scaffold_2690_17
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(12317..12964)
-----------------
DNA (648bp)
protein (216aa)
2-oxoacid ferredoxin oxidoreductase, subunit beta {ECO:0000313|EMBL:KKS03172.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23
hypothetical protein
2-oxoacid ferredoxin oxidoreductase, subunit beta
gwd1_scaffold_2690_18
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(13089..14813)
-----------------
DNA (1725bp)
protein (575aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:KKS03173.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011
hypothetical protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
gwd1_scaffold_2690_19
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(14794..17661)
-----------------
DNA (2868bp)
protein (956aa)
acetyl coenzyme A synthetase; K09181 hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Acetyl coenzyme A synthase alpha subunit
gwd1_scaffold_2690_20
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

17703..18488
-----------------
DNA (786bp)
protein (262aa)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KKS03175.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
Short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR
gwd1_scaffold_2690_21
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(18499..18996)
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
cytoplasmic protein
Cytoplasmic protein
Displaying 21 items

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