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SCNpilot_expt_300_bf_scaffold_72

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Displaying items 1-30 of 197 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_72_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27..374)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Prevotella multisaccharivorax DSM 17128 RepID=F8N8X1_9BACT
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30708.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacter
hypothetical protein
SCNpilot_expt_300_bf_scaffold_72_2
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(390..914)
DNA (525bp) protein (175aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1684 spec
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI000372E285
SCNpilot_expt_300_bf_scaffold_72_3
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(1423..3210)
DNA (1788bp) protein (596aa)
hypothetical protein cdivTM_06952 id=4041146 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein Tax=GWC2_TM7_44_17_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_72_4
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3246..4304)
DNA (1059bp) protein (353aa)
peptidase C60 sortase A and B Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
Hypothetical conserved protein id=2440946 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
peptidase C60 sortase A and B
SCNpilot_expt_300_bf_scaffold_72_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4375..6021)
DNA (1647bp) protein (549aa)
transporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4069
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS88472.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
SCNpilot_expt_300_bf_scaffold_72_6
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(6124..6570)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PY81_9BACT
hypothetical protein Tax=CG_TM7_01
hypothetical protein
SCNpilot_expt_300_bf_scaffold_72_7
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(6567..7892)
DNA (1326bp) protein (442aa)
hypothetical protein cdivTM_06942 id=4041148 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
membrane protein of unknown function Tax=GWC2_TM7_44_17_curated
membrane protein of unknown function
SCNpilot_expt_300_bf_scaffold_72_8
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

7935..9371
DNA (1437bp) protein (479aa)
Undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=CG_TM7_01
Undecaprenyl-phosphate galactose phosphotransferase id=4041150 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Undecaprenyl-phosphate galactose phosphotransferase
SCNpilot_expt_300_bf_scaffold_72_9
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

9375..10496
DNA (1122bp) protein (374aa)
Glycosyl transferase, group 1 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
Glycosyl transferase, group 1 id=4041151 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Glycosyl transferase, group 1
SCNpilot_expt_300_bf_scaffold_72_10
unknown

Not on your lists

10581..10952
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_72_11
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11020..12045)
DNA (1026bp) protein (342aa)
id=2439699 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
id=2439699 Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_300_bf_scaffold_72_12
unknown

Not on your lists

12126..12527
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_72_13
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12628..13383)
DNA (756bp) protein (252aa)
HAD family hydrolase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000365C2F2
HAD-superfamily hydrolase; K07024 Tax=CG_TM7_01
HAD family hydrolase
SCNpilot_expt_300_bf_scaffold_72_14
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13383..13829)
DNA (447bp) protein (149aa)
tagD; glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39) Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
hypothetical protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21F3
glycerol-3-phosphate cytidylyltransferase
SCNpilot_expt_300_bf_scaffold_72_15
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

13888..14769
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candida
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) RepID=Q8FSP0_COREF
glucose-1-phosphate thymidylyltransferase
SCNpilot_expt_300_bf_scaffold_72_16
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(14819..16645)
DNA (1827bp) protein (609aa)
glmS; Glucosamine/fructose-6-phosphate aminotransferase, isomerizing (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PMR0_9BACT rbh
SCNpilot_expt_300_bf_scaffold_72_17
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

16807..17817
DNA (1011bp) protein (337aa)
UDP-glucose 4-epimerase n=2 Tax=Clostridium RepID=D3AHP9_9CLOT rbh
UDP-galactose-4-epimerase
UDP-galactose-4-epimerase {ECO:0000313|EMBL:AJA06641.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
SCNpilot_expt_300_bf_scaffold_72_18
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

17887..18432
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FS16_ISOV2
Uncharacterised protein {ECO:0000313|EMBL:CRH89121.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;
hypothetical protein
SCNpilot_expt_300_bf_scaffold_72_19
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

18413..20068
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2506
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA06953.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
SCNpilot_expt_300_bf_scaffold_72_20
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20070..21218)
DNA (1149bp) protein (383aa)
Glycosyl transferase family 2 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M558_GEODF
family 2 glycosyl transferase
Glycosyltransferase {ECO:0000313|EMBL:ACM19813.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (str
SCNpilot_expt_300_bf_scaffold_72_21
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(21225..24251)
DNA (3027bp) protein (1009aa)
Glycosyltransferase sugar-binding region containing DXD motif family protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3J4_9FIRM
Glycosyltransferase sugar-binding region containing DXD motif family protein {ECO:0000313|EMBL:CCY22624.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bac
Mannosyltransferase OCH1 and related enzymes
SCNpilot_expt_300_bf_scaffold_72_22
Brachyspira hampsonii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(24235..26661)
DNA (2427bp) protein (809aa)
Glycosyl transferase n=1 Tax=Brachyspira hampsonii 30446 RepID=L0X0K3_9SPIR rbh
Glycosyl transferase {ECO:0000313|EMBL:EKV56320.1}; TaxID=1289135 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hampsonii 30446.;"
glycosyl transferase
SCNpilot_expt_300_bf_scaffold_72_23

Not on your lists

comp(26728..27834)
DNA (1107bp) protein (369aa)
UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] id=5100228 bin=WS6_GWC1_33_20 species=WS6_GWE1_33_547 genus=WS6_GWE1_33_547 taxon_order=WS6_GWE1_33_547 taxon_class=WS6_GWE1_33_547 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria) rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KKP54876.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
UDP-N-acetylglucosamine 2-epimerase
SCNpilot_expt_300_bf_scaffold_72_24
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

comp(27835..28689)
DNA (855bp) protein (285aa)
reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=5100227 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria) rbh
Reductase, dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KKP43490.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KKP43490.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate div
reductase
SCNpilot_expt_300_bf_scaffold_72_25

Not on your lists

comp(28686..29687)
DNA (1002bp) protein (334aa)
hypothetical protein id=5100226 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria) rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP54874.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Capsular polysaccharide biosynthesis protein CapD
SCNpilot_expt_300_bf_scaffold_72_26
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(29750..30898)
DNA (1149bp) protein (383aa)
sugar ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
teichoic acid ABC transporter ATP-binding protein
Polysaccharide export ATP-binding protein id=4376435 bin=GWC2_TM7_48_9 species=Streptococcus iniae genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
SCNpilot_expt_300_bf_scaffold_72_27
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(30898..31689)
DNA (792bp) protein (264aa)
polysaccharide permease n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2499
polysaccharide permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
SCNpilot_expt_300_bf_scaffold_72_28
RHI_OP11_45_10, Microgenomates, Bacteria

Not on your lists

31738..32880
DNA (1143bp) protein (381aa)
glycosyl transferase group 1 protein (EC:2.4.1.-) id=5802273 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
group 1 glycosyl transferase Tax=RIFCSPHIGHO2_12_FULL_OP11_45_10_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_72_29
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

32880..34013
DNA (1134bp) protein (378aa)
Putative glycosyl transferase group 1 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PVG1_9BACT rbh
putative glycosyl transferase group 1
Putative glycosyl transferase group 1 {ECO:0000313|EMBL:AGL62215.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborge
SCNpilot_expt_300_bf_scaffold_72_30
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

34010..35080
DNA (1071bp) protein (357aa)
sucC; succinyl-CoA synthetase (beta subunit) (EC:6.2.1.5) Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
sucC; succinyl-CoA synthetase (beta subunit) (EC:6.2.1.5)
succinyl-CoA synthetase subunit beta id=4041255 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Displaying items 1-30 of 197 in total

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