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ACD2_1

Alias: ACD2_2232.19262.61

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_1_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

892..2028
DNA (1137bp) protein (379aa)
892..2028 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
ACD2_1_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

2028..2654
DNA (627bp) protein (209aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions 15..37 Tax=ACD2
ACD2_1_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

2654..3007
DNA (354bp) protein (118aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=ACD2
ACD2_1_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

3074..3814
DNA (741bp) protein (247aa)
hypothetical protein (db=KEGG evalue=4.0e-09 bit_score=65.1 identity=22.86 coverage=80.9716599190283)
hypothetical protein alias=ACD2_C00001G00004,ACD2_2232.19262.61G0004,ACD2_2232.19262.61_4 id=33823 tax=ACD2 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD2
ACD2_1_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(3816..4079)
DNA (264bp) protein (88aa)
3816..4079 - (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_1_6
ACD2, Gracilibacteria, Bacteria

Not on your lists


4363..5676
DNA (1314bp) protein (438aa)
Protein translocase subunit SecY
transmembrane_regions (db=TMHMM db_id=tmhmm from=76 to=98)
transmembrane_regions (db=TMHMM db_id=tmhmm from=122 to=144)
transmembrane_regions (db=TMHMM db_id=tmhmm from=215 to=237)
ACD2_1_7
ACD2, Gracilibacteria, Bacteria

Not on your lists

5794..6396
DNA (603bp) protein (201aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=187 evalue=5.0e-34 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=1 to=186 evalue=3.2e-22)
Exonuc_X-T (db=HMMPfam db_id=PF00929 from=4 to=180 evalue=1.1e-19 interpro_id=IPR013520 interpro_description=Exonuclease, RNase T/DNA polymerase III)
ACD2_1_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

6500..6805
DNA (306bp) protein (102aa)
seg (db=Seg db_id=seg from=67 to=90)
seg (db=Seg db_id=seg from=2 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=56)
ACD2_1_9
unknown

Not on your lists

6875..8161
DNA (1287bp) protein (429aa)
Peptidase M16 domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MS29_9DELT (db=UNIREF evalue=9.0e-08 bit_score=62.0 identity=21.05 coverage=75.7575757575758)
seg (db=Seg db_id=seg from=312 to=321)
LuxS/MPP-like metallohydrolase (db=superfamily db_id=SSF63411 from=15 to=194 evalue=5.9e-20 interpro_id=IPR011249 interpro_description=Metalloenzyme, LuxS/M16 peptidase-like, metal-binding GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
LuxS/MPP-like metallohydrolase (db=superfamily db_id=SSF63411 from=224 to=409 evalue=3.8e-12 interpro_id=IPR011249 interpro_description=Metalloenzyme, LuxS/M16 peptidase-like, metal-binding GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
ACD2_1_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(8165..8368)
DNA (204bp) protein (68aa)
8165..8368 - (rbs_motif=TAAA rbs_spacer=5bp)
hypothetical protein Tax=ACD2
ACD2_1_11
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(8375..8935)
DNA (561bp) protein (187aa)
mpg; DNA-3-methyladenine glycosylase (3mg) (EC:3.2.2.21)
Pur_DNA_glyco (db=HMMPfam db_id=PF02245 from=5 to=184 evalue=6.3e-50 interpro_id=IPR003180 interpro_description=Methylpurine-DNA glycosylase (MPG) GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: alkylbase DNA N-glycosylase activity (GO:0003905), Biological Process: base-excision repair (GO:0006284))
FMT C-terminal domain-like (db=superfamily db_id=SSF50486 from=1 to=186 evalue=3.1e-43 interpro_id=IPR011034 interpro_description=Formyl transferase, C-terminal-like GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=Gene3D db_id=G3DSA:3.10.300.10 from=3 to=186 evalue=9.1e-43 interpro_id=IPR003180 interpro_description=Methylpurine-DNA glycosylase (MPG) GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: alkylbase DNA N-glycosylase activity (GO:0003905), Biological Process: base-excision repair (GO:0006284))
ACD2_1_12
ACD2, Gracilibacteria, Bacteria

Not on your lists

10400..11350
DNA (951bp) protein (317aa)
seg (db=Seg db_id=seg from=115 to=135)
seg (db=Seg db_id=seg from=37 to=50)
seg 37..50 Tax=ACD2
ACD2_1_13
ACD2, Gracilibacteria, Bacteria

Not on your lists

12277..13473
DNA (1197bp) protein (399aa)
sam-dependent methyltransferase
sam-dependent methyltransferase
sam-dependent methyltransferase
Putative uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHN5_9SPHI (db=UNIREF evalue=9.0e-81 bit_score=304.0 identity=43.04 coverage=95.2380952380952)
ACD2_1_14
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(13556..14209)
DNA (654bp) protein (218aa)
hydroxyacylglutathione hydrolase
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=6 to=201 evalue=6.2e-38)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=21 to=193 evalue=6.7e-28)
Lactamase_B (db=HMMPfam db_id=PF00753 from=18 to=190 evalue=1.9e-24)
ACD2_1_15
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(14328..14816)
DNA (489bp) protein (163aa)
14328..14816 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
ACD2_1_16
ACD2, Gracilibacteria, Bacteria

Not on your lists

15268..15591
DNA (324bp) protein (108aa)
15268..15591 + (rbs_motif=TAA rbs_spacer=13bp)
hypothetical protein Tax=ACD2
ACD2_1_17
ACD2, Gracilibacteria, Bacteria

Not on your lists

15599..18412
DNA (2814bp) protein (938aa)
seg (db=Seg db_id=seg from=213 to=230)
coiled-coil (db=Coil db_id=coil from=849 to=870 evalue=NA)
coiled-coil (db=Coil db_id=coil from=811 to=839 evalue=NA)
coiled-coil 811..839 Tax=ACD2
ACD2_1_18
ACD2, Gracilibacteria, Bacteria

Not on your lists

18402..19202
DNA (801bp) protein (267aa)
seg (db=Seg db_id=seg from=5 to=23)
seg (db=Seg db_id=seg from=241 to=256)
seg 5..23 Tax=ACD2
Displaying 18 items

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