Alias: ACD2_889.43724.61
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD2_26_1
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(52..2334)
|
recQ n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017453DF (db=UNIREF evalue=5.0e-91 bit_score=339.0 identity=30.21 coverage=92.1156373193167)
RecQ familyATP-dependent DNA helicase
RecQ familyATP-dependent DNA helicase
RecQ familyATP-dependent DNA helicase
|
|
ACD2_26_2
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
2558..4174
|
2558..4174 + (rbs_motif=TAAAAA rbs_spacer=8bp)
hypothetical protein Tax=ACD2
|
|
ACD2_26_3
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
4711..5991
|
seg (db=Seg db_id=seg from=354 to=365)
seg 354..365 Tax=ACD2
|
|
ACD2_26_4
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
6170..6466
|
PadR family transcriptional regulator
PadR (db=HMMPfam db_id=PF03551 from=1 to=74 evalue=4.7e-16 interpro_id=IPR005149 interpro_description=Transcription regulator PadR N-terminal-like)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=98 evalue=1.1e-15)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=89 evalue=2.9e-08 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
|
|
ACD2_26_5
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
6477..7949
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=117 to=136)
seg (db=Seg db_id=seg from=366 to=382)
seg (db=Seg db_id=seg from=270 to=283)
transmembrane_regions (db=TMHMM db_id=tmhmm from=140 to=162)
|
|
ACD2_26_6
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(7942..8547)
|
seg (db=Seg db_id=seg from=16 to=29)
seg (db=Seg db_id=seg from=95 to=104)
seg 16..29 Tax=ACD2
|
|
ACD2_26_7
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(8682..9239)
|
O-methyltransferase
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=7 to=150 evalue=8.2e-26)
O-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10509 from=19 to=185 evalue=3.9e-20 interpro_id=IPR002935 interpro_description=O-methyltransferase, family 3 GO=Molecular Function: O-methyltransferase activity (GO:0008171))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=2 to=178 evalue=2.0e-19)
|
|
ACD2_26_8
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(9361..11745)
|
seg (db=Seg db_id=seg from=662 to=673)
seg (db=Seg db_id=seg from=327 to=342)
seg (db=Seg db_id=seg from=237 to=251)
seg (db=Seg db_id=seg from=186 to=201)
|
|
ACD2_26_9
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(11934..12473)
|
TPR-like (db=superfamily db_id=SSF48452 from=19 to=158 evalue=5.8e-16)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=30 to=150 evalue=1.9e-13 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (db=HMMPanther db_id=PTHR23083 from=12 to=151 evalue=2.0e-08)
TETRATRICOPEPTIDE REPEAT PROTEIN 7, TPR7 (db=HMMPanther db_id=PTHR23083:SF16 from=12 to=151 evalue=2.0e-08)
|
|
ACD2_26_10
unknown
|
Not on your lists |
comp(12543..14324)
|
Clp protease ATP binding subunit n=2 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I5K9_9ACTO (db=UNIREF evalue=1.0e-25 bit_score=122.0 identity=27.79 coverage=49.6632996632997)
CLPB2; member of the clp superfamily, regulatory beta subunit (db=KEGG evalue=4.0e-22 bit_score=110.0 identity=24.64 coverage=50.5050505050505)
seg (db=Seg db_id=seg from=459 to=474)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=66 to=376 evalue=2.3e-22)
|
|
ACD2_26_11
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
14442..15035
|
seg (db=Seg db_id=seg from=44 to=55)
seg 44..55 Tax=ACD2
|
|
ACD2_26_12
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(15032..17731)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=876 to=893)
seg (db=Seg db_id=seg from=829 to=863)
seg (db=Seg db_id=seg from=703 to=715)
seg (db=Seg db_id=seg from=674 to=693)
|
|
ACD2_26_13
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
18192..18878
|
18192..18878 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
|
|
ACD2_26_14
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
19269..19739
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
seg (db=Seg db_id=seg from=20 to=30)
seg (db=Seg db_id=seg from=99 to=103)
transmembrane_regions 77..99 Tax=ACD2
|
|
ACD2_26_15
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
20756..21280
|
seg (db=Seg db_id=seg from=51 to=65)
seg 51..65 Tax=ACD2
|
|
ACD2_26_16
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(22009..22131)
|
22009..22131 - (rbs_motif=TAAA rbs_spacer=5bp)
hypothetical protein Tax=ACD2
|
|
ACD2_26_17
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(22624..22788)
|
22624..22788 - (rbs_motif=TAA rbs_spacer=6bp)
hypothetical protein Tax=ACD2
|
|
ACD2_26_18
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(22843..23118)
|
seg (db=Seg db_id=seg from=44 to=55)
seg (db=Seg db_id=seg from=76 to=90)
seg 44..55 Tax=ACD2
|
|
ACD2_26_19
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(23189..24313)
|
seg (db=Seg db_id=seg from=97 to=110)
seg (db=Seg db_id=seg from=5 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
coiled-coil (db=Coil db_id=coil from=227 to=248 evalue=NA)
|
|
ACD2_26_20
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(24321..25514)
|
seg (db=Seg db_id=seg from=257 to=264)
seg (db=Seg db_id=seg from=7 to=18)
seg (db=Seg db_id=seg from=322 to=333)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
|
|
ACD2_26_21
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(25541..26035)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=8 to=22)
transmembrane_regions 7..29 Tax=ACD2
|
|
ACD2_26_22
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(26223..27563)
|
hemN; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
seg (db=Seg db_id=seg from=9 to=22)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=30 to=446 evalue=5.9e-64)
COPROPORPHYRINIGEN III OXIDASE (db=HMMPanther db_id=PTHR13932 from=70 to=430 evalue=8.3e-48)
|
|
ACD2_26_23
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(27538..28335)
|
27538..28335 - (rbs_motif=TACAA rbs_spacer=8bp)
hypothetical protein Tax=ACD2
|
|
ACD2_26_24
unknown
|
Not on your lists |
comp(28337..29269)
|
Peptidase U32 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QZC4_9FIRM (db=UNIREF evalue=3.0e-15 bit_score=86.3 identity=24.68 coverage=93.5691318327974)
hypothetical protein (db=KEGG evalue=3.0e-15 bit_score=85.9 identity=23.17 coverage=94.5337620578778)
Peptidase_U32 (db=HMMPfam db_id=PF01136 from=89 to=194 evalue=1.1e-21 interpro_id=IPR001539 interpro_description=Peptidase U32 GO=Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233))
Peptidase U32 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QZC4_9FIRM Tax=ACD2
|
|
ACD2_26_25
unknown
|
Not on your lists |
comp(29269..30213)
|
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B1H3_RUMGN (db=UNIREF evalue=6.0e-08 bit_score=62.0 identity=23.45 coverage=67.6190476190476)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=1 to=282 evalue=2.1e-13)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B1H3_RUMGN Tax=ACD2
|
|
ACD2_26_26
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
30243..30554
|
30243..30554 + (rbs_motif=TAAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
|
|
ACD2_26_27
unknown
|
Not on your lists |
30544..31980
|
His-Xaa-Ser system radical SAM maturase HxsB
Putative arylsulfatase regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L3T3_RUMHA (db=UNIREF evalue=2.0e-58 bit_score=230.0 identity=32.91 coverage=93.5281837160751)
seg (db=Seg db_id=seg from=160 to=172)
seg (db=Seg db_id=seg from=332 to=339)
|
|
ACD2_26_28
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
32040..35354
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=757 to=768)
transmembrane_regions 9..31 Tax=ACD2
|
|
ACD2_26_29
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
35451..36335
|
seg (db=Seg db_id=seg from=5 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions 5..22 Tax=ACD2
|
|
ACD2_26_30
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
36314..37342
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=319 to=341)
seg (db=Seg db_id=seg from=38 to=57)
seg (db=Seg db_id=seg from=113 to=127)
seg (db=Seg db_id=seg from=158 to=174)
|