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ACD2_53_1

Organism: ACD2

partial RP 39 / 55 MC: 7 BSCG 35 / 51 MC: 1 ASCG 0 / 38
Location: comp(2..565)

Top 3 Functional Annotations

Value Algorithm Source
elf family DNA-directed RNA polymerase sigma subunit sigw similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 172.0
  • Bit_score: 96
  • Evalue 1.20e-17
seg (db=Seg db_id=seg from=94 to=103) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=19 to=169 evalue=3.4e-30 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.40e-30

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Taxonomy

ACD2 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGATGGAACTATCAGACAAAGACCTTATCGAAAGATGTCTTGCAGGCAATTCAGACTGCTTTCGTCATCTGGTTCTACGTTATGAAAAGCCACTCTTTGCCTATCTGATGCGCAGACTTAAAGACAGGCAGCTTGCTACTGATGCTGCGCAGGAGTCGCTTATAAGAGCCTATCTGGGGCTTTCCAATCTAATAAAGCCAGAAGCCTTTCACTCATGGCTCATCGGTATCGGGGCAAGAGTCGCTCTTGAGTTTTACCGCGCACATAAGCGTCAACTCGGAATTTCTGGCGAAATTGAAGAAATATCTACTGAAAAGGCGCAGAAATTTGAAGAATATCAGCTCGACGAAATGATAGCCGAACTGCCTGAAAACCAGCGGCAAATGATATTGTTGCGCTACTACGAGTGTTATTCCTGCCAGCAGATCGCCGAAACCCTCAATGTTCCTGTTGGCACAGTAACCAAAACGATATCGAGAGCATATGACTCTCTCAGACAGAAGCTTCAGGCTGAAGGATTTGTATTTTTGGAGGCACAGTCATGAACTGCAATGAATGCAAAG
PROTEIN sequence
Length: 188
MMELSDKDLIERCLAGNSDCFRHLVLRYEKPLFAYLMRRLKDRQLATDAAQESLIRAYLGLSNLIKPEAFHSWLIGIGARVALEFYRAHKRQLGISGEIEEISTEKAQKFEEYQLDEMIAELPENQRQMILLRYYECYSCQQIAETLNVPVGTVTKTISRAYDSLRQKLQAEGFVFLEAQSGTAMNAK