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SCNpilot_cont_500_bf_scaffold_1140

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1140_1
unknown

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1140_trna_2
unknown

Not on your lists

comp(449..520)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1140_2
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

956..2122
DNA (1167bp) protein (389aa)
putative NADH:ubiquinone reductase (H(+)-translocating) (EC:1.6.5.3)
NADH dehydrogenase Ndh id=2440665 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1140_3
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(2119..2754)
DNA (636bp) protein (212aa)
Mg2 transporter protein CorA family protein id=2445111 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1140_4
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

3254..4465
DNA (1212bp) protein (404aa)
4-alpha-glucanotransferase id=2440667 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative Glycosyl transferase, group 1 family rbh
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1140_5
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

4462..5691
DNA (1230bp) protein (410aa)
id=5226657 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
hypothetical protein rbh
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1140_6
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

5684..7630
DNA (1947bp) protein (649aa)
Glycoside hydrolase 15-related protein id=2440674 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative Glycoside hydrolase 15-related protein rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1140_7
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

7631..8302
DNA (672bp) protein (224aa)
id=5226659 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB42595.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
SCNpilot_cont_500_bf_scaffold_1140_8
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8299..8505)
DNA (207bp) protein (69aa)
hypothetical protein cdiviTM7_01327 id=2440680 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpmG; 50S ribosomal protein L33 2
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1140_9
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8584..8985)
DNA (402bp) protein (134aa)
NUDIX hydrolase id=2445594 bin=GWC2_TM7_44_17 species=Amycolatopsis azurea genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
NUDIX hydrolase
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1140_10

Not on your lists

comp(9263..9811)
DNA (549bp) protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS82881.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
hypothetical protein id=8525 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
SCNpilot_cont_500_bf_scaffold_1140_11
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(9892..10161)
DNA (270bp) protein (90aa)
hypothetical protein cdivTM7_00891 id=4440333 bin=GWC2_TM7_48_9 species=candidate division TM7 single-cell isolate TM7b genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW05180.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
SCNpilot_cont_500_bf_scaffold_1140_12
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10206..11525)
DNA (1320bp) protein (440aa)
Putative RNA methyltransferase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PNQ2_9BACT rbh
putative RNA methyltransferase rbh
Putative RNA methyltransferase {ECO:0000313|EMBL:AGL62609.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_1140_trna_1
unknown

Not on your lists

11598..11671
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1140_13
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11782..12432)
DNA (651bp) protein (217aa)
hypothetical protein cdivTM7_00881 id=2440878 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1140_14
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12459..13292)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PWM8_9BACT
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1140_15
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13289..14455)
DNA (1167bp) protein (389aa)
ribosomal large subunit pseudouridine synthase, RluD subfamily protein, partial id=2440889 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1140_16
R_RIF_OD1_04_46_36, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

14563..15927
DNA (1365bp) protein (455aa)
serine/threonine protein phosphatase; K01090 protein phosphatase [EC:3.1.3.16] id=52737 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_04_46_36_curated
SCNpilot_cont_500_bf_scaffold_1140_17
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(15988..16386)
DNA (399bp) protein (133aa)
ribosomal protein S9 id=4440356 bin=GWC2_TM7_48_9 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Ribosomal protein S9 {ECO:0000313|EMBL:KKW05188.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
rpsI; ribosomal protein S9
SCNpilot_cont_500_bf_scaffold_1140_18
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(16388..16828)
DNA (441bp) protein (147aa)
ribosomal protein L13, partial id=4440361 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Ribosomal protein L13, nonfunctional {ECO:0000313|EMBL:KKW05189.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
rplM; ribosomal protein L13
SCNpilot_cont_500_bf_scaffold_1140_19
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(16828..17214)
DNA (387bp) protein (129aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=5226668 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
rplQ; ribosomal protein L17 (BL15)
SCNpilot_cont_500_bf_scaffold_1140_20
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17217..18140)
DNA (924bp) protein (308aa)
rpoA; RNA polymerase (alpha subunit) (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit alpha, partial id=2440932 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1140_21
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(18159..18776)
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2693 rbh
rpsD; 30S ribosomal subunit protein S4
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1140_22
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(18780..19175)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PZK7_9BACT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
rpsK; ribosomal protein S11 (BS11)
SCNpilot_cont_500_bf_scaffold_1140_23
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(19191..19577)
DNA (387bp) protein (129aa)
30S ribosomal protein S13 id=2440942 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsM; ribosomal protein S13
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1140_24
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19580..19696)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RYA2_9BACT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
SCNpilot_cont_500_bf_scaffold_1140_25
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19717..19920)
DNA (204bp) protein (68aa)
Translation initiation factor IF-1 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PM28_9BACT
infA; initiation factor IF-I
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_1140_26
unknown

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comp(20175..20543)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1140_27
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(20683..22098)
DNA (1416bp) protein (472aa)
Preprotein translocase subunit SecY, nonfunctional n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RW48_9BACT rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
secY; preprotein translocase subunit
SCNpilot_cont_500_bf_scaffold_1140_28
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(22654..23136)
DNA (483bp) protein (161aa)
ribosomal protein L15 id=2440948 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplO; ribosomal protein L15
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
Displaying items 1-30 of 73 in total

View Taxonomy