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SCNpilot_cont_500_bf_scaffold_1392

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1392_1
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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3..317
DNA (315bp) protein (105aa)
50S ribosomal protein L7/L12 id=2440402 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplL; ribosomal protein L12 (BL9)
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1392_2
unknown

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490..999
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1392_3
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(1096..1833)
DNA (738bp) protein (246aa)
UPF0246 protein Strop_2927 id=3934426 bin=GWC2_TM7_48_9 species=Salinispora tropica genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW03147.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
hypothetical protein; K09861 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1392_4
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1940..2671
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN46107.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Putative uncharacterized protein id=2750864 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1392_5
unknown

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2678..2893
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1392_6
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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2984..3502
DNA (519bp) protein (173aa)
50S ribosomal protein L7/L12 id=5226628 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:AHB42564.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1392_7
unknown

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3590..4120
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1392_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

4322..5413
DNA (1092bp) protein (364aa)
dnaX; DNA polymerase III (gamma and tau subunits) (EC:2.7.7.7)
putative DNA polymerase III, gamma/tau subunits id=2440396 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1392_9
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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5385..5720
DNA (336bp) protein (112aa)
putative DNA polymerase III, gamma/tau subunits id=2440396 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1392_10
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

5760..7133
DNA (1374bp) protein (458aa)
Replicative DNA helicase id=2440393 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Replicative DNA helicase
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1392_11
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

7158..8588
DNA (1431bp) protein (477aa)
Putative uncharacterized protein id=2440390 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
conserved membrane protein of unknown function rbh
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1392_12
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

8638..8928
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PXZ0_9BACT
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1392_13
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

8947..9564
DNA (618bp) protein (206aa)
Recombination protein RecR n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PZE5_9BACT
recR; DNA repair and recombination protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1392_14
unknown

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comp(9678..10328)
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1392_15
unknown

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10499..10987
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1392_16
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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11069..12067
DNA (999bp) protein (333aa)
Putative phosphoesterase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PWI1_9BACT
putative phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:AGL62630.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_1392_17
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

12048..13508
DNA (1461bp) protein (487aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16) rbh
Cysteine--tRNA ligase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PNS2_9BACT rbh
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1392_18
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13505..14650)
DNA (1146bp) protein (382aa)
Putative uncharacterized protein (Fragment) id=2440374 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
conserved membrane protein of unknown function
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1392_19
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

14709..16373
DNA (1665bp) protein (555aa)
Oxidoreductase (Fragment) id=2440180 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative oxidoreductase
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1392_20
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

16403..16723
DNA (321bp) protein (107aa)
Uncharacterized protein id=2440179 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1392_21
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

16769..17446
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family id=2440178 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
two component transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1392_22
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

17459..18511
DNA (1053bp) protein (351aa)
putative Histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase id=2440177 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1392_23
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

18559..19941
DNA (1383bp) protein (461aa)
Putative ABC transporter permease protein id=2440176 bin=GWC2_TM7_44_17 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ABC transporter permease
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1392_24
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

19953..20624
DNA (672bp) protein (224aa)
ABC transporter related protein id=2440175 bin=GWC2_TM7_44_17 species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1392_25
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

20734..21222
DNA (489bp) protein (163aa)
Transcription elongation factor GreA id=2440173 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1392_26
unknown

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comp(21343..21846)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1392_27
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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21932..24469
DNA (2538bp) protein (846aa)
HAD superfamily ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
Calcium-translocating P-type ATPase, PMCA-type (Fragment) id=2440171 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1392_28
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(24595..24846)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVS1_9BACT
hypothetical protein
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1392_29
unknown

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25451..25717
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1392_30
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25674..27176
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB3_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80848.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 30 items

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