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SCNpilot_expt_500_p_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 316 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_125_1
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

547..1215
DNA (669bp) protein (223aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
SCNpilot_expt_500_p_scaffold_125_2
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

1205..1684
DNA (480bp) protein (160aa)
id=2445376 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
SCNpilot_expt_500_p_scaffold_125_3
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

1681..2469
DNA (789bp) protein (263aa)
atpA; ATP synthase subunit alpha (EC:3.6.3.14)
Sodium-transporting two-sector ATPase id=2445373 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
SCNpilot_expt_500_p_scaffold_125_4
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

2484..2993
DNA (510bp) protein (170aa)
atpA; ATP synthase subunit alpha (EC:3.6.3.14)
Sodium-transporting two-sector ATPase id=2445373 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
SCNpilot_expt_500_p_scaffold_125_5
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

3000..3881
DNA (882bp) protein (294aa)
ATP synthase gamma chain id=2445370 bin=GWC2_TM7_44_17 species=[Clostridium] hiranonis genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
atpG; ATP synthase gamma chain
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
SCNpilot_expt_500_p_scaffold_125_6
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

3878..5179
DNA (1302bp) protein (434aa)
atpD; ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta id=2445367 bin=GWC2_TM7_44_17 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
SCNpilot_expt_500_p_scaffold_125_7
RHI_Saccharibacteria_47_17, Candidatus Saccharibacteria, Bacteria

Not on your lists

5181..5447
DNA (267bp) protein (89aa)
id=2445365 bin=GWC2_TM7_44_17 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_17_curated
SCNpilot_expt_500_p_scaffold_125_8
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

5599..6372
DNA (774bp) protein (258aa)
id=2445380 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_125_9
Podospora anserina, Podospora, Sordariales, Sordariomycetidae, Ascomycota, Fungi

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6374..15637
DNA (9264bp) protein (3088aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PWU5_DICFS
Uncharacterized protein {ECO:0000313|EMBL:CDP24287.1}; TaxID=515849 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora.;" source="Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383); (Pleurage anserina).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_125_10
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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15736..16239
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=2445386 bin=GWC2_TM7_44_17 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_125_11
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

16903..18114
DNA (1212bp) protein (404aa)
Peptidase M14 carboxypeptidase A id=4357916 bin=GWC2_TM7_44_17 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
peptidase M14 carboxypeptidase A
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_125_12
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

18521..18718
DNA (198bp) protein (66aa)
hypothetical protein
hypothetical protein cdiviTM7_01565 id=5226416 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_125_13
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(18768..19229)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PYT7_9BACT
hypothetical protein
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_125_14
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19204..20025)
DNA (822bp) protein (274aa)
ROK family protein id=4357923 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ROK family protein rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_125_15
unknown

Not on your lists

20270..20695
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_125_16
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

20893..21972
DNA (1080bp) protein (360aa)
RNA binding S1 domain protein id=4357975 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpfA; 30S ribosomal protein S1
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_125_17
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

22055..23857
DNA (1803bp) protein (601aa)
translation initiation factor IF-2, partial id=4357976 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
infB; initiation factor IF-2 rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_125_18
unknown

Not on your lists

24126..24986
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_125_19
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

25056..26693
DNA (1638bp) protein (546aa)
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_125_20
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

26755..27189
DNA (435bp) protein (145aa)
hypothetical protein cdivTM_08533 id=2641490 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW01440.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_125_21
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(27193..28215)
DNA (1023bp) protein (341aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
methionyl-tRNA formyltransferase id=4357979 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_125_22
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(28218..28796)
DNA (579bp) protein (193aa)
putative Peptide deformylase (EC:3.5.1.88)
peptide deformylase id=2641482 bin=GWC2_TM7_48_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Peptide deformylase {ECO:0000313|EMBL:KKW01438.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
SCNpilot_expt_500_p_scaffold_125_23
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

29029..29577
DNA (549bp) protein (183aa)
id=2440654 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_125_24
unknown

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29558..30529
DNA (972bp) protein (324aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_125_25
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(30533..32473)
DNA (1941bp) protein (647aa)
primosome assembly protein PriA id=4357981 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_125_26
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

32696..33352
DNA (657bp) protein (219aa)
phosphoribosyltransferase id=5226429 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
Phosphoribosyltransferase {ECO:0000313|EMBL:AHB42365.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_125_27
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

33423..33725
DNA (303bp) protein (101aa)
hypothetical protein
predicted ARSR subfamily of helix-turn-helix bacterial transcription regulatory protein id=4357983 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_125_28
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

33750..35435
DNA (1686bp) protein (562aa)
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
single-stranded-DNA-specific exonuclease RecJ id=4357984 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_125_29
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

35469..36296
DNA (828bp) protein (276aa)
exported protein of unknown function
Prepilin-type N-terminal cleavage/methylation domain-containing protein id=5226427 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_125_30
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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36356..36571
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PN95_9BACT
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000313|EMBL:AGL62419.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
Displaying items 1-30 of 316 in total

View Taxonomy