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SCNpilot_expt_500_p_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 196 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_179_1
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(943..1380)
DNA (438bp) protein (146aa)
Putative integral membrane protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PYT3_9BACT
putative integral membrane protein
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_179_2
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(1387..3933)
DNA (2547bp) protein (849aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3) rbh
DNA gyrase subunit A n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PVW2_9BACT rbh
SCNpilot_expt_500_p_scaffold_179_3
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3951..5924)
DNA (1974bp) protein (658aa)
gyrB; DNA gyrase (subunit B) (EC:5.99.1.3) rbh
Gyrase subunit B protein {ECO:0000313|EMBL:KKW04390.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
DNA gyrase subunit B id=4893595 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
SCNpilot_expt_500_p_scaffold_179_4
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

6148..7704
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLC2_9BACT
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AGL62393.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_expt_500_p_scaffold_179_5
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

7704..8300
DNA (597bp) protein (199aa)
Putative uncharacterized protein id=5226408 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_500_p_scaffold_179_6
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8306..11263)
DNA (2958bp) protein (986aa)
Uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_500_p_scaffold_179_7
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11334..11762)
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=4893599 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW04394.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_179_8
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11887..12282)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RV48_9BACT
membrane protein of unknown function
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_179_9
unknown

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comp(13146..13844)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_179_10
unknown

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comp(14035..14268)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_179_11
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

14847..16370
DNA (1524bp) protein (508aa)
id=5226403 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
putative bifunctional enzyme and transcriptional regulator rbh
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_179_12
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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16518..17054
DNA (537bp) protein (179aa)
translation initiation factor IF-3 id=4893630 bin=GWC2_TM7_48_9 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
infC; initiation factor IF-3
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_179_13
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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17101..17295
DNA (195bp) protein (65aa)
hypothetical protein cdiviTM7_00366 id=4042044 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpmI; 50S ribosomal protein L35
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_179_14
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


17358..17702
DNA (345bp) protein (115aa)
50S ribosomal protein L20 id=4042043 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplT; ribosomal protein L20
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_179_15
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

17804..19198
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PZC2_9BACT
membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AGL62606.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_expt_500_p_scaffold_179_16
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19762..20799)
DNA (1038bp) protein (346aa)
fructose-2,6-bisphosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Ribonuclease H id=4042042 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_179_17
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(21060..21695)
DNA (636bp) protein (212aa)
putative zinc metalloprotease ywhC (EC:3.4.24.-)
Zn-dependent membrane-bound protease, M50 family protein id=4042041 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_179_18
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

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comp(22095..23090)
DNA (996bp) protein (332aa)
BNR/Asp-box repeat protein id=4260272 bin=GWA2_Ignavibacteria_55_11 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
exported protein of unknown function
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
SCNpilot_expt_500_p_scaffold_179_19
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(23122..23757)
DNA (636bp) protein (212aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein id=4042037 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_179_20
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(23775..24389)
DNA (615bp) protein (205aa)
probable transcriptional regulator id=4042036 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_179_21
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(24556..25485)
DNA (930bp) protein (310aa)
putative tRNA dimethylallyltransferase (EC:2.5.1.75) rbh
miaA id=4042035 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_179_22
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(25470..25739)
DNA (270bp) protein (90aa)
putative 6-O-methylguanine DNA methyltransferase id=5226393 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB42329.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
putative Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein
SCNpilot_expt_500_p_scaffold_179_23
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(25783..26376)
DNA (594bp) protein (198aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=4893640 bin=GWC2_TM7_48_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:KKW04407.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
SCNpilot_expt_500_p_scaffold_179_24
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(26379..28196)
DNA (1818bp) protein (606aa)
thrZ; threonyl-tRNA synthetase (EC:6.1.1.3) rbh
threonyl-tRNA synthetase id=4042033 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_179_25
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(29025..30734)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RWM6_9BACT
conserved membrane protein of unknown function
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_500_p_scaffold_179_26
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(30745..31122)
DNA (378bp) protein (126aa)
id=4042029 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_179_27
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(31329..32030)
DNA (702bp) protein (234aa)
sodA; Superoxide dismutase [Mn] (EC:1.15.1.1)
Superoxide dismutase id=4893647 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_179_28
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(32040..33104)
DNA (1065bp) protein (355aa)
hypothetical protein cdiviTM7_03053, partial id=4042025 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_179_29
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(33085..33618)
DNA (534bp) protein (178aa)
hypothetical protein cdiviTM7_03058, partial id=5226385 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
hypothetical protein
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_179_30
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(33651..34274)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PXT0_9BACT
exported protein of unknown function
Tax=BJP_IG2103_TM7_39_1400
Displaying items 1-30 of 196 in total

View Taxonomy