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alan_book_18_scaffold_215654

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
alan_book_18_scaffold_215654_1
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


224..532
DNA (309bp) protein (103aa)
50S ribosomal protein L21
50S ribosomal protein L21 id=3001295 bin=GWC1_CPR2_39_9 species=unknown genus=Candidatus Arthromitus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=CG_CPR17-01
alan_book_18_scaffold_215654_2
unknown

Not on your lists

792..1343
DNA (552bp) protein (184aa)

This feature has no annotations

alan_book_18_scaffold_215654_3
unknown

Not on your lists

1343..1732
DNA (390bp) protein (130aa)

This feature has no annotations

alan_book_18_scaffold_215654_4
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(1850..3391)
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6S2_TERSS
GMP synthase
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
alan_book_18_scaffold_215654_5
Sulfuricurvum sp. PC08-66, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3415..4908)
DNA (1494bp) protein (498aa)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00015246};; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1539066 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. PC08-66.;"
Probable cytosol aminopeptidase n=1 Tax=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) RepID=A7H3C2_CAMJD
leucyl aminopeptidase
alan_book_18_scaffold_215654_6
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4938..6431)
DNA (1494bp) protein (498aa)
Secretory lipase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2V5_DEIPD
Secretory lipase
Secretory lipase {ECO:0000313|EMBL:AFZ67779.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
alan_book_18_scaffold_215654_7
unknown

Not on your lists

comp(6428..6907)
DNA (480bp) protein (160aa)
GCN5-related N-acetyltransferase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7Y2_HERA2
N-acetyltransferase GCN5
alan_book_18_scaffold_215654_8
R_SM2F11_43_23, SM2F11, Bacteria

Not on your lists

comp(6918..7847)
DNA (930bp) protein (310aa)
Thioredoxin reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKB8_9CHLR
thioredoxin reductase
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_43_23_curated
alan_book_18_scaffold_215654_9
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8300..8647)
DNA (348bp) protein (116aa)
YGGT family protein id=2440164 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
alan_book_18_scaffold_215654_10
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(8902..9276)
DNA (375bp) protein (125aa)
cupin 2 conserved barrel domain protein id=35654 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Cupin 2 barrel domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
alan_book_18_scaffold_215654_11
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

Not on your lists

9293..9697
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSU0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDK72502.1}; Flags: Precursor;; TaxID=443342 species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
hypothetical protein
alan_book_18_scaffold_215654_12
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

comp(9700..11136)
DNA (1437bp) protein (479aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ81495.1}; TaxID=1618960 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
Putative uncharacterized protein id=4224961 bin=GWC2_TM7_48_9 species=Thioalkalimicrobium cyclicum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
hypothetical protein
alan_book_18_scaffold_215654_13
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11659..12834)
DNA (1176bp) protein (392aa)
Serine proteasec {ECO:0000313|EMBL:KJF16230.1}; EC=3.4.21.- {ECO:0000313|EMBL:KJF16230.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
Colicin V production protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2A4_ACIFD
Colicin V production protein
alan_book_18_scaffold_215654_14
unknown

Not on your lists

comp(12957..13724)
DNA (768bp) protein (256aa)

This feature has no annotations

alan_book_18_scaffold_215654_15
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13810..14397)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q605F7_METCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU91612.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
alan_book_18_scaffold_215654_16
R_OD1_Uhrbacteria_60_10, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14397..14780)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B3BFE6
death-on-curing family protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_60_10_curated
alan_book_18_scaffold_215654_17
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15024..15446)
DNA (423bp) protein (141aa)
id=4224966 bin=GWC2_TM7_48_9 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=CG_TM7_01
alan_book_18_scaffold_215654_18
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(15443..15709)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIV2_9FIRM
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_11_curated
alan_book_18_scaffold_215654_19
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

15940..16251
DNA (312bp) protein (104aa)
Tax=BJP_IG2103_TM7_39_1400
alan_book_18_scaffold_215654_20
CG_Moran_01, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16253..19354)
DNA (3102bp) protein (1034aa)
cch:Cag_1196 adenine specific DNA methyltransferase id=22456 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
adenine-specific DNA methyltransferase
Tax=CG_Moran_01
alan_book_18_scaffold_215654_21
unknown

Not on your lists

19469..19843
DNA (375bp) protein (125aa)

This feature has no annotations

alan_book_18_scaffold_215654_22
R_OP11_Woesebacteria_39_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(20004..20399)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DWD2_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_10_curated
alan_book_18_scaffold_215654_23
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

20534..21094
DNA (561bp) protein (187aa)
hypothetical protein
Uncharacterized protein id=5226815 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB42751.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
alan_book_18_scaffold_215654_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21144..21779)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B36E16
integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:BAJ73764.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
alan_book_18_scaffold_215654_25
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

21834..22862
DNA (1029bp) protein (343aa)
Putative uncharacterized protein id=2441181 bin=GWC2_TM7_44_17 species=Brachybacterium faecium genus=Brachybacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
brp/Blh family beta-carotene 15,15'-monooxygenase
Tax=GWC2_TM7_44_17_curated
alan_book_18_scaffold_215654_26
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22855..23403)
DNA (549bp) protein (183aa)
nuclease (EC:3.1.31.1)
Micrococcal nuclease n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIQ2_THET1
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
alan_book_18_scaffold_215654_27
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

comp(23412..24560)
DNA (1149bp) protein (383aa)
Rod shape-determining protein RodA id=1273289 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
rod shape-determining protein RodA
Tax=GWE1_Berkelbacteria_39_12
alan_book_18_scaffold_215654_28
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(24544..27459)
DNA (2916bp) protein (972aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5095665 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
isoleucyl-tRNA synthetase
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
alan_book_18_scaffold_215654_29
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

comp(27714..27974)
DNA (261bp) protein (87aa)
Tax=CG_CPR17-01
alan_book_18_scaffold_215654_30
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(27997..28467)
DNA (471bp) protein (157aa)
Transcriptional repressor NrdR n=1 Tax=Eubacterium infirmum F0142 RepID=H1PNC6_9FIRM
nrdR; transcriptional regulator NrdR
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
Displaying items 1-30 of 85 in total

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