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ar4r2_scaffold_928

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_928_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(234..1433)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GCJ7_9BACT
hypothetical protein
Tax=ACD3
ar4r2_scaffold_928_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(1445..2017)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G179_9BACT
lema family protein
Tax=ACD3
ar4r2_scaffold_928_3

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2202..3221
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G458_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE30023.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_928_4
unknown

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3245..3724
DNA (480bp) protein (160aa)

This feature has no annotations

ar4r2_scaffold_928_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(3755..5386)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034DCE92 rbh
M48B family peptidase rbh
Tax=RBG_16_Micrarchaeota_36_9_curated
ar4r2_scaffold_928_6

Not on your lists

5514..6089
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AYE7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66757.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_928_7
unknown

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6175..10341
DNA (4167bp) protein (1389aa)

This feature has no annotations

Nothing from interpro Jill Banfield (11/9/16)
ar4r2_scaffold_928_8

Not on your lists

comp(10356..10976)
DNA (621bp) protein (207aa)
seg 114..125 id=124273 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD29435.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_928_9

Not on your lists

11082..12113
DNA (1032bp) protein (344aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-); K06941 ribosomal RNA large subunit methyltransferase N [EC:2.1.1.-] id=69426 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
rlmN2; ribosomal RNA large subunit methyltransferase N 2 (EC:2.1.1.- 2.1.1.192)
Uncharacterized protein {ECO:0000313|EMBL:EKD66544.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_928_10

Not on your lists

12267..12875
DNA (609bp) protein (203aa)
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=124603 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ar4r2_scaffold_928_11
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12941..13690)
DNA (750bp) protein (250aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C5A5_THEGP
Methionine aminopeptidase {ECO:0000313|EMBL:KKR79587.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
ar4r2_scaffold_928_12
unknown

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comp(13705..14958)
DNA (1254bp) protein (418aa)

This feature has no annotations

ar4r2_scaffold_928_13
Edhazardia aedis, Edhazardia, Microsporidia, Fungi

Not on your lists

comp(14969..16621)
DNA (1653bp) protein (551aa)
Uncharacterized protein (Fragment) n=1 Tax=Edhazardia aedis (strain USNM 41457) RepID=J9DA38_EDHAE
Uncharacterized protein {ECO:0000313|EMBL:EJW04586.1}; Flags: Fragment;; TaxID=1003232 species="Eukaryota; Fungi; Microsporidia; Edhazardia.;" source="Edhazardia aedis (strain USNM 41457) (Microsporidian parasite).;"
Cell surface protein
Large, membrane anchored non-cytoplasmic protein Jill Banfield (11/9/16)
ar4r2_scaffold_928_14
unknown

Not on your lists

comp(16695..16883)
DNA (189bp) protein (63aa)

This feature has no annotations

ar4r2_scaffold_928_15

Not on your lists

comp(16962..19538)
DNA (2577bp) protein (859aa)
cce:Ccel_0327 ATPase AAA-2 domain protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=124289 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD30249.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ATPase AAA rbh
ar4r2_scaffold_928_16
unknown

Not on your lists

19746..20231
DNA (486bp) protein (162aa)

This feature has no annotations

ar4r2_scaffold_928_17

Not on your lists

20342..21172
DNA (831bp) protein (277aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD29483.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
seg 11..31 id=124231 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
ar4r2_scaffold_928_18
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(21229..22146)
DNA (918bp) protein (306aa)
coiled-coil 147..171 id=69610 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=ACD49
ar4r2_scaffold_928_19
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22250..22756)
DNA (507bp) protein (169aa)
Integrase catalytic subunit n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KQN4_9GAMM
Integrase catalytic subunit {ECO:0000313|EMBL:ERG18313.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
transposase
Displaying 19 items

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