ggKbase home page

ar4r2_scaffold_2758

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2758_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..338)
DNA (336bp) protein (112aa)
Transposase IS66 n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA26_9CLOT
Transposase IS66 {ECO:0000313|EMBL:EHJ01792.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ar4r2_scaffold_2758_2
unknown

Not on your lists

comp(388..699)
DNA (312bp) protein (104aa)

This feature has no annotations

ar4r2_scaffold_2758_3
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

859..1785
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXV3_9BACT id=3041 bin=ACD11 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Filamentation induced by cAMP protein Fic
Tax=BJP_IG2103_TM7_39_1400
ar4r2_scaffold_2758_4
Leptospira terpstrae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1806..3455
DNA (1650bp) protein (550aa)
Type III restriction enzyme, res subunit n=1 Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1VU25_9LEPT rbh
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:EMY60497.1}; TaxID=1257025 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639.;"
DNA or RNA helicase of superfamily II rbh
ar4r2_scaffold_2758_5
unknown

Not on your lists

3472..5604
DNA (2133bp) protein (711aa)

This feature has no annotations

ar4r2_scaffold_2758_6
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(5717..6310)
DNA (594bp) protein (198aa)
DedA family protein id=5095433 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
DedA family protein {ECO:0000313|EMBL:KKQ69258.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
SNARE associated Golgi protein
ar4r2_scaffold_2758_7
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(6300..6620)
DNA (321bp) protein (107aa)
transmembrane_regions id=5802170 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Uncharacterized protein {ECO:0000313|EMBL:KKR05439.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
ar4r2_scaffold_2758_8
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6854..7972
DNA (1119bp) protein (373aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
Chorismate synthase n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZP92_9BACE rbh
chorismate synthase
ar4r2_scaffold_2758_9
RIFOXYD2_FULL_Sulfurimonas_37_8_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8138..8830)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GNT3_9BACT rbh
damage-inducible protein D
Tax=RIFOXYD2_FULL_Sulfurimonas_37_8_curated
ar4r2_scaffold_2758_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(8974..9837)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LM11_9FIRM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
ar4r2_scaffold_2758_11
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9924..10118)
DNA (195bp) protein (65aa)
bcgIB; restriction enzyme BgcI subunit beta (EC:3.1.21.-)
Type I restriction modification DNA specificity protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CDD5_9FLAO
Type I restriction modification DNA specificity protein {ECO:0000313|EMBL:EJL69389.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
Displaying 11 items

View Taxonomy