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ar4r2_scaffold_1375

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1375_1
unknown

Not on your lists

comp(3..293)
DNA (291bp) protein (97aa)

This feature has no annotations

ar4r2_scaffold_1375_2

Not on your lists

comp(299..649)
DNA (351bp) protein (117aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FV33_9BACT
ar4r2_scaffold_1375_3

Not on your lists

comp(687..929)
DNA (243bp) protein (81aa)
seg 2..12 id=69173 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD65999.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1375_trna_4
unknown

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comp(1097..1170)
DNA (74bp)
transferRNA Met
ar4r2_scaffold_1375_trna_3
unknown

Not on your lists

comp(1190..1261)
DNA (72bp)
transferRNA Met
ar4r2_scaffold_1375_trna_2
unknown

Not on your lists

comp(1350..1421)
DNA (72bp)
transferRNA Glu
ar4r2_scaffold_1375_4

Not on your lists

1559..2830
DNA (1272bp) protein (424aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C66 id=132210 bin=ACD80 species=Methylophilales bacterium HTCC2181 genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD80 organism_group=SR1
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
ar4r2_scaffold_1375_5
unknown

Not on your lists

2933..4402
DNA (1470bp) protein (490aa)

This feature has no annotations

ar4r2_scaffold_1375_6
unknown

Not on your lists

comp(4446..4880)
DNA (435bp) protein (145aa)

This feature has no annotations

ar4r2_scaffold_1375_7

Not on your lists

comp(5316..6524)
DNA (1209bp) protein (403aa)
hypothetical protein; K07133 id=3350 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE15864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_1375_8

Not on your lists

comp(7202..8611)
DNA (1410bp) protein (470aa)
lba:Lebu_0493 FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=123848 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD30234.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1375_9

Not on your lists

comp(8618..9397)
DNA (780bp) protein (260aa)
UPI0003CFDF16 related cluster n=1 Tax=unknown RepID=UPI0003CFDF16
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD29262.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1375_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9682..10623
DNA (942bp) protein (314aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007, ECO:0000313|EMBL:CEP97430.1};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Clostridium sordellii RepID=T0CRN6_CLOSO
mraW; S-adenosyl-methyltransferase MraW
domain is found inserted into bacterial SAM-dependent methyltransferases Jill Banfield (11/8/16)
ar4r2_scaffold_1375_11

Not on your lists

10645..11004
DNA (360bp) protein (120aa)
transmembrane_regions 28..50 id=69120 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD65981.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1375_12
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

Not on your lists

comp(11026..11421)
DNA (396bp) protein (132aa)
Putative transcriptional regulator id=2112793 bin=GWD2_Clostridiales_32_59 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
rirA; iron-responsive transcriptional regulator
Tax=GWD2_Clostridiales_32_59_curated
ar4r2_scaffold_1375_13
unknown

Not on your lists

comp(11445..12620)
DNA (1176bp) protein (392aa)

This feature has no annotations

ar4r2_scaffold_1375_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


12896..16264
DNA (3369bp) protein (1123aa)
tde:TDE2339 leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=124253 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Tax=CG_GN02-01
ar4r2_scaffold_1375_15

Not on your lists

16338..16964
DNA (627bp) protein (209aa)
hypothetical protein id=68955 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66339.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1375_16
unknown

Not on your lists

comp(17028..17246)
DNA (219bp) protein (73aa)

This feature has no annotations

ar4r2_scaffold_1375_17

Not on your lists

comp(17272..17739)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PIB3_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK96699.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
ar4r2_scaffold_1375_trna_1
unknown

Not on your lists

comp(17877..17958)
DNA (82bp)
transferRNA Leu
ar4r2_scaffold_1375_18
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

18071..19066
DNA (996bp) protein (332aa)
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20CB id=123629 bin=ACD78 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
sortase family protein
Tax=CG_GN02-02
ar4r2_scaffold_1375_19
unknown

Not on your lists

19068..19331
DNA (264bp) protein (88aa)

This feature has no annotations

ar4r2_scaffold_1375_20
RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

19438..19878
DNA (441bp) protein (147aa)
Single-stranded DNA-binding protein n=1 Tax=uncultured bacterium RepID=K1Z192_9BACT
single-strand binding protein
Tax=RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated
ar4r2_scaffold_1375_21

Not on your lists

comp(19933..20172)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FY56_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26832.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Protein phnA
ar4r2_scaffold_1375_22

Not on your lists

comp(20266..20736)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ46_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD30221.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1375_23

Not on your lists

comp(20747..21199)
DNA (453bp) protein (151aa)
AP4A hydrolase id=123837 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
AP4A hydrolase {ECO:0000313|EMBL:EKD30222.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1375_24

Not on your lists

21436..23568
DNA (2133bp) protein (711aa)
Elongation factor G n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYJ9_9BACT rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
translation elongation factor G rbh
ar4r2_scaffold_1375_25

Not on your lists

comp(23617..24006)
DNA (390bp) protein (130aa)
Elongation factor G n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G791_9BACT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
translation elongation factor 2 (EF-2/EF-G)
Displaying 29 items

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