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ar4r2_scaffold_597

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_597_1
Candidatus Desulfamplus magnetomortis, Candidatus Desulfamplus, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1009)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Candidatus Desulfamplus magnetomortis RepID=L0R6Y2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCO06731.1}; TaxID=1246637 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Desulfamplus.;" source="Candidatus Desulfamplus magnetomortis.;"
hypothetical protein
ar4r2_scaffold_597_2

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2284..5031
DNA (2748bp) protein (916aa)
translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=32635 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
translation initiation factor IF-2 rbh
ar4r2_scaffold_597_3

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5052..5483
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD30122.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
cAMP-binding protein
ar4r2_scaffold_597_4
unknown

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5562..5918
DNA (357bp) protein (119aa)

This feature has no annotations

ar4r2_scaffold_597_5

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5896..6594
DNA (699bp) protein (233aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5R3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26421.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_597_6

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6596..7408
DNA (813bp) protein (271aa)
glycosyl transferase family protein (EC:2.4.1.187)
glycosyl transferase, WecB/TagA/CpsF family protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0045 id=51000 bin=ACD3 species=Epulopiscium sp. 'N.t. morphotype B' genus=Epulopiscium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Glycosyl transferase, WecB/TagA/CpsF family protein {ECO:0000313|EMBL:EKE28810.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_597_7

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comp(7429..8229)
DNA (801bp) protein (267aa)
hypothetical protein CLOSPO_01346 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI00017945D8 id=68888 bin=ACD49 species=Clostridium sporogenes genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66124.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_597_8

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comp(8256..10667)
DNA (2412bp) protein (804aa)
bmq:BMQ_4742 pheT; phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=14075 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20) rbh
ar4r2_scaffold_597_9

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comp(10754..11359)
DNA (606bp) protein (202aa)
Putative transcriptional regulator n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G7H5_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:EKE30342.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
transcriptional regulator
ar4r2_scaffold_597_trna_1
unknown

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11538..11610
DNA (73bp)
transferRNA Lys
ar4r2_scaffold_597_10
unknown

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11825..12328
DNA (504bp) protein (168aa)

This feature has no annotations

ar4r2_scaffold_597_11
CG_GN02-02, Gracilibacteria, Bacteria

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12412..14586
DNA (2175bp) protein (725aa)
acl:ACL_1339 Tex protein-related transcription accessory protein; K06959 id=50030 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Tex protein-related transcription accessory protein with S1 RNA binding domain
Tax=CG_GN02-02
ar4r2_scaffold_597_12
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14631..15785)
DNA (1155bp) protein (385aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO44080.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Bifunctional protein aas id=4618750 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
ar4r2_scaffold_597_13
unknown

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comp(15789..16958)
DNA (1170bp) protein (390aa)

This feature has no annotations

ar4r2_scaffold_597_14

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comp(16964..18175)
DNA (1212bp) protein (404aa)
hypothetical protein
transmembrane_regions 244..266 id=982836 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25638.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_597_15
CG_GN02-02, Gracilibacteria, Bacteria

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18468..19070
DNA (603bp) protein (201aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=124613 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
50S ribosomal protein L3
Tax=CG_GN02-02
ar4r2_scaffold_597_16
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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19091..19714
DNA (624bp) protein (208aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5097535 bin=PER_GWF2_39_17 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L4, large subunit ribosomal protein L4 {ECO:0000313|EMBL:KKR07787.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
50S ribosomal protein L4
ar4r2_scaffold_597_17
ACD78, Gracilibacteria, Bacteria

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19733..20026
DNA (294bp) protein (98aa)
ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 id=124612 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rplW; 50S ribosomal protein L23
Tax=ACD78
ar4r2_scaffold_597_18

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20057..20902
DNA (846bp) protein (282aa)
50S ribosomal protein L2 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4C6_9BACT rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
50S ribosomal protein L2 rbh
ar4r2_scaffold_597_19

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21016..21282
DNA (267bp) protein (89aa)
30S ribosomal protein S19 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNJ7_9FIRM id=124496 bin=ACD78 species=Subdoligranulum variabile genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rpsS; 30S ribosomal protein S19
ar4r2_scaffold_597_20

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21313..21639
DNA (327bp) protein (109aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=50184 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
50S ribosomal protein L22
ar4r2_scaffold_597_21
CG_GN02-02, Gracilibacteria, Bacteria

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21669..22307
DNA (639bp) protein (213aa)
30S ribosomal protein S3 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GDD2_9BACT
rpsC; 30S ribosomal protein S3
Tax=CG_GN02-02
ar4r2_scaffold_597_22

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22352..22756
DNA (405bp) protein (135aa)
50S ribosomal protein L16 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FZ55_9BACT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rplP; 50S ribosomal protein L16
ar4r2_scaffold_597_23
unknown

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22767..22991
DNA (225bp) protein (75aa)

This feature has no annotations

ar4r2_scaffold_597_24

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23015..23233
DNA (219bp) protein (73aa)
ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=34042 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
30S ribosomal protein S17
ar4r2_scaffold_597_25

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23270..23638
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=50178 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
50S ribosomal protein L14
ar4r2_scaffold_597_26
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

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23683..24033
DNA (351bp) protein (117aa)
50S ribosomal protein L24 n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWX5_9AQUI
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
50S ribosomal protein L24
ar4r2_scaffold_597_27
CG_GN02-01, Gracilibacteria, Bacteria

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24064..24603
DNA (540bp) protein (180aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=50180 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rplE; 50S ribosomal protein L5
Tax=CG_GN02-01
ar4r2_scaffold_597_28

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24628..24852
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XW93_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD29527.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
30S ribosomal protein S14
ar4r2_scaffold_597_29

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24895..25287
DNA (393bp) protein (131aa)
ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=34015 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
30S ribosomal protein S8
Displaying items 1-30 of 53 in total

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