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ar4r2_scaffold_647

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_647_1
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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3..1061
DNA (1059bp) protein (353aa)
Putative uncharacterized protein id=3382834 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=GWA1_Bdellovibrionales_52_35_curated
ar4r2_scaffold_647_2
unknown

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1217..1852
DNA (636bp) protein (212aa)

This feature has no annotations

ar4r2_scaffold_647_3

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1965..5009
DNA (3045bp) protein (1015aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5Z2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE26501.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
transcription-repair coupling factor rbh
ar4r2_scaffold_647_4
Ostreococcus 'lucimarinus', Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

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4997..5584
DNA (588bp) protein (196aa)
Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) RepID=A4S1Z5_OSTLU
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; Flags: Fragment;; TaxID=436017 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source="Ostreococcus lucimarinus (strain CCE9901).;"
peptidylprolyl isomerase, FKBP-type
ar4r2_scaffold_647_5

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comp(5629..6138)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BW24_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66464.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_647_6

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comp(6313..9654)
DNA (3342bp) protein (1114aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4B7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE29137.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_647_7
unknown

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comp(10438..11016)
DNA (579bp) protein (193aa)

This feature has no annotations

ar4r2_scaffold_647_8
CG_GN02-01, Gracilibacteria, Bacteria

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comp(11152..12303)
DNA (1152bp) protein (384aa)
type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=69473 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
type IV pilin
Tax=CG_GN02-01
ar4r2_scaffold_647_9

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comp(12330..13595)
DNA (1266bp) protein (422aa)
pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E id=123617 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD30028.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_647_10
unknown

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comp(13613..14815)
DNA (1203bp) protein (401aa)

This feature has no annotations

ar4r2_scaffold_647_11
unknown

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comp(14824..15666)
DNA (843bp) protein (281aa)

This feature has no annotations

ar4r2_scaffold_647_12
ACD78, Gracilibacteria, Bacteria

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comp(15755..18352)
DNA (2598bp) protein (866aa)
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DnaQ family exonuclease/DinG family helicase rbh
Tax=ACD78
ar4r2_scaffold_647_13
unknown

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comp(18366..18755)
DNA (390bp) protein (130aa)

This feature has no annotations

ar4r2_scaffold_647_14
unknown

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18823..19497
DNA (675bp) protein (225aa)

This feature has no annotations

ar4r2_scaffold_647_15
unknown

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19499..20143
DNA (645bp) protein (215aa)

This feature has no annotations

ar4r2_scaffold_647_16
CG_GN02-01, Gracilibacteria, Bacteria

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comp(20194..20904)
DNA (711bp) protein (237aa)
pseudouridine synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] id=124002 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rluB; protein RluB (EC:4.2.1.70)
Tax=CG_GN02-01
ar4r2_scaffold_647_17

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comp(20911..21795)
DNA (885bp) protein (295aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=69641 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylenolpyruvoylglucosamine reductase
ar4r2_scaffold_647_18
unknown

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comp(21786..22100)
DNA (315bp) protein (105aa)

This feature has no annotations

ar4r2_scaffold_647_19

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comp(22106..24991)
DNA (2886bp) protein (962aa)
gka:GK3085 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=69640 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Excinuclease ABC subunit A rbh
ar4r2_scaffold_647_20
unknown

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comp(25098..25547)
DNA (450bp) protein (150aa)

This feature has no annotations

ar4r2_scaffold_647_21
RBG_13_OP11_Levybacteria_35_9_curated, Levybacteria, Microgenomates, Bacteria

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comp(25612..26322)
DNA (711bp) protein (237aa)
ComFC; amidophosphoribosyltransferase id=5095115 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
amidophosphoribosyltransferase
Tax=RBG_13_OP11_Levybacteria_35_9_curated
ar4r2_scaffold_647_22
CG_PER_03, Peregrinibacteria, Bacteria

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comp(26414..26653)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAI6_9CLOT id=983182 bin=RAAC1_SR1 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC1_SR1 organism_group=SR1
hypothetical protein
Tax=CG_PER_03
ar4r2_scaffold_647_23
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(26655..28058)
DNA (1404bp) protein (468aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=123414 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
pepA; putative cytosol aminopeptidase (EC:3.4.11.1 3.4.11.10)
Tax=ACD78
ar4r2_scaffold_647_24

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comp(28092..28700)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXY5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26762.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying 24 items

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