ggKbase home page

AR1-0.1_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_15_1
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..265
DNA (264bp) protein (88aa)
Integrase catalytic subunit n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SFM2_9FLAO
Integrase catalytic subunit {ECO:0000313|EMBL:ESU25067.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
transposase
AR1-0.1_scaffold_15_2
GWF2_WS6_complete_39_15, WS6, Bacteria

Not on your lists

460..2130
DNA (1671bp) protein (557aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=15188580 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome rbh
Prolyl-tRNA synthetase {ECO:0000313|EMBL:KKR06405.1}; TaxID=1619100 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
proS2; prolyl-tRNA synthetase rbh
AR1-0.1_scaffold_15_3
unknown

Not on your lists

2137..2289
DNA (153bp) protein (51aa)

This feature has no annotations

AR1-0.1_scaffold_15_4
unknown

Not on your lists

2308..2427
DNA (120bp) protein (40aa)

This feature has no annotations

AR1-0.1_scaffold_15_5
ACD78, Gracilibacteria, Bacteria

Not on your lists

2492..3148
DNA (657bp) protein (219aa)
Two component transcriptional regulator, winged helix family n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YXS5_9BACT
transcriptional regulator
Tax=ACD78
AR1-0.1_scaffold_15_6

Not on your lists

3160..4014
DNA (855bp) protein (285aa)
Sensor histidine kinase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V235_9AQUI id=982234 bin=RAAC1_SR1 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RAAC1_SR1 organism_group=SR1
Sensor histidine kinase
Sensor protein {ECO:0000313|EMBL:EKE26129.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_15_7
unknown

Not on your lists

4330..4767
DNA (438bp) protein (146aa)

This feature has no annotations

AR1-0.1_scaffold_15_8

Not on your lists

4862..5833
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJ29_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK96441.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
AR1-0.1_scaffold_15_9

Not on your lists

5970..7298
DNA (1329bp) protein (443aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase (EC:2.7.7.21) id=50236 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:EKE27507.1}; EC=2.7.7.72 {ECO:0000313|EMBL:EKE27507.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
AR1-0.1_scaffold_15_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

7378..8022
DNA (645bp) protein (215aa)
Putative uncharacterized protein id=2194093 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
AR1-0.1_scaffold_15_11
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8026..8244
DNA (219bp) protein (73aa)
UPI0003D1B997 related cluster n=1 Tax=unknown RepID=UPI0003D1B997
Putative transcriptional regulator {ECO:0000313|EMBL:ETA67831.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
transcriptional regulator
AR1-0.1_scaffold_15_12
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8275..8817)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANV5_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH50662.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
AR1-0.1_scaffold_15_13
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8929..9777)
DNA (849bp) protein (283aa)
id=5048261 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
AR1-0.1_scaffold_15_14
unknown

Not on your lists

comp(9965..11203)
DNA (1239bp) protein (413aa)

This feature has no annotations

AR1-0.1_scaffold_15_15
unknown

Not on your lists

11520..11915
DNA (396bp) protein (132aa)

This feature has no annotations

AR1-0.1_scaffold_15_trna_5
unknown

Not on your lists

comp(11998..12068)
DNA (71bp)
transferRNA Gln
AR1-0.1_scaffold_15_16
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(12118..13410)
DNA (1293bp) protein (431aa)
Trigger factor n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XX47_9BACT rbh
trigger factor
Tax=ACD78
AR1-0.1_scaffold_15_17

Not on your lists

13722..14783
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FEU6_9BACT rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
NusA antitermination factor
AR1-0.1_scaffold_15_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14825..15265
DNA (441bp) protein (147aa)
50S ribosomal protein L9 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVY7_CLOBO
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
AR1-0.1_scaffold_15_19
Fusobacterium sp. OBRC1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

15281..15670
DNA (390bp) protein (130aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1032505 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. OBRC1.;"
Putative Holliday junction resolvase n=1 Tax=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 RepID=A5TW60_FUSNP
YqgF family RNAse H domain-containing protein
AR1-0.1_scaffold_15_20
R_RIF_OP11_01_40_20, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

comp(15667..16758)
DNA (1092bp) protein (364aa)
Glycosyl transferase group 1 n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T7L2_THEIA
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_01_40_20_curated
AR1-0.1_scaffold_15_21
unknown

Not on your lists

16923..18122
DNA (1200bp) protein (400aa)

This feature has no annotations

AR1-0.1_scaffold_15_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

18197..18892
DNA (696bp) protein (232aa)
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=123270 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hrcA; heat-inducible transcription repressor
Tax=CG_GN02-01
AR1-0.1_scaffold_15_23
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(18966..20387)
DNA (1422bp) protein (474aa)
nde:NIDE2807 pykF; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] id=124006 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
hypothetical protein
Tax=CG_GN02-02
AR1-0.1_scaffold_15_24

Not on your lists

comp(20449..25749)
DNA (5301bp) protein (1767aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=123368 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD29873.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Isoleucine-tRNA ligase
AR1-0.1_scaffold_15_25

Not on your lists

comp(25863..26366)
DNA (504bp) protein (168aa)
coiled-coil 144..165 id=34976 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE30105.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_15_26
unknown

Not on your lists

comp(26403..26648)
DNA (246bp) protein (82aa)

This feature has no annotations

AR1-0.1_scaffold_15_27
unknown

Not on your lists

comp(26651..27298)
DNA (648bp) protein (216aa)

This feature has no annotations

AR1-0.1_scaffold_15_28
unknown

Not on your lists

comp(27596..27796)
DNA (201bp) protein (67aa)

This feature has no annotations

AR1-0.1_scaffold_15_29

Not on your lists

comp(27909..28124)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5Z9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26511.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying items 1-30 of 63 in total

View Taxonomy