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ACD3_64

Alias: ACD3_101.21017.66

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_64_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

255..563
DNA (309bp) protein (103aa)
255..563 + (rbs_motif=TAA rbs_spacer=6bp)
hypothetical protein Tax=ACD3
ACD3_64_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

572..1678
DNA (1107bp) protein (369aa)
572..1678 + (rbs_motif=TTAA rbs_spacer=8bp)
hypothetical protein Tax=ACD3
ACD3_64_3
ACD3, Gracilibacteria, Bacteria

Not on your lists

1690..2631
DNA (942bp) protein (314aa)
coiled-coil (db=Coil db_id=coil from=286 to=314 evalue=NA)
seg (db=Seg db_id=seg from=290 to=305)
coiled-coil 286..314 Tax=ACD3
ACD3_64_4
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(3171..3761)
DNA (591bp) protein (197aa)
seg (db=Seg db_id=seg from=23 to=34)
seg 23..34 Tax=ACD3
ACD3_64_5
ACD3, ACD3, ACD3, ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(3820..3912)
DNA (93bp) protein (31aa)
seg (db=Seg db_id=seg from=17 to=22)
ACD3_64_6
ACD3, Gracilibacteria, Bacteria

Not on your lists

4063..4461
DNA (399bp) protein (133aa)
4063..4461 + (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
ACD3_64_7
unknown

Not on your lists

4641..5027
DNA (387bp) protein (129aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Turicibacter sp. PC909 RepID=D4W680_9FIRM (db=UNIREF evalue=1.0e-31 bit_score=138.0 identity=53.23 coverage=95.3488372093023)
CMP/dCMP deaminase zinc-binding protein
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=54 to=94 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
Cytidine deaminase-like (db=superfamily db_id=SSF53927 from=1 to=127 evalue=4.0e-18 interpro_id=IPR016193 interpro_description=Cytidine deaminase-like GO=Molecular Function: catalytic activity (GO:0003824))
ACD3_64_8
unknown

Not on your lists

5252..5773
DNA (522bp) protein (174aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A63CF (db=UNIREF evalue=3.0e-42 bit_score=174.0 identity=49.69 coverage=91.3793103448276)
3-demethylubiquinone-9 3-methyltransferase
Predicted S-adenosyl-L-methionine dependent 3-demethylubiquinone-9 3-methyltransferase (db=HMMPIR db_id=PIRSF021700 from=2 to=170 evalue=2.1e-63 interpro_id=IPR009725 interpro_description=3-demethylubiquinone-9 3-O-methyltransferase)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=11 to=169 evalue=2.7e-44)
ACD3_64_9
unknown

Not on your lists

comp(5884..6207)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSZ8_9CLOT (db=UNIREF evalue=7.0e-32 bit_score=139.0 identity=58.88 coverage=98.1481481481482)
protein of unknown function DUF74
YbjQ-like (db=superfamily db_id=SSF117782 from=4 to=107 evalue=9.7e-27)
DUF74 (db=HMMPfam db_id=PF01906 from=6 to=106 evalue=6.3e-26 interpro_id=IPR002765 interpro_description=Uncharacterised protein family UPF0145)
ACD3_64_10
ACD3, Gracilibacteria, Bacteria

Not on your lists

6356..7300
DNA (945bp) protein (315aa)
seg (db=Seg db_id=seg from=4 to=16)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=17 evalue=5.0)
seg 4..16 Tax=ACD3
ACD3_64_11
ACD3, Gracilibacteria, Bacteria

Not on your lists

7326..7433
DNA (108bp) protein (36aa)
7326..7433 + (rbs_motif=TTAA rbs_spacer=9bp)
hypothetical protein Tax=ACD3
ACD3_64_12
ACD3, Gracilibacteria, Bacteria

Not on your lists

7443..8330
DNA (888bp) protein (296aa)
aldose 1-epimerase (db=KEGG evalue=2.0e-12 bit_score=76.6 identity=25.0 coverage=92.2297297297297)
seg (db=Seg db_id=seg from=126 to=142)
Galactose mutarotase-like (db=superfamily db_id=SSF74650 from=7 to=262 evalue=8.7e-16 interpro_id=IPR011013 interpro_description=Glycoside hydrolase-type carbohydrate-binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: carbohydrate binding (GO:0030246))
no description (db=Gene3D db_id=G3DSA:2.70.98.10 from=7 to=283 evalue=1.8e-08 interpro_id=IPR014718 interpro_description=Glycoside hydrolase-type carbohydrate-binding, subgroup GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: carbohydrate binding (GO:0030246))
ACD3_64_13
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(8473..8820)
DNA (348bp) protein (116aa)
8473..8820 - (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD3
ACD3_64_14
ACD3, Gracilibacteria, Bacteria

Not on your lists

9003..9287
DNA (285bp) protein (95aa)
9003..9287 + (rbs_motif=TTA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
hypothetical protein
ACD3_64_15
ACD3, Gracilibacteria, Bacteria

Not on your lists

9356..10060
DNA (705bp) protein (235aa)
9356..10060 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD3
ACD3_64_16
ACD3, Gracilibacteria, Bacteria

Not on your lists

10153..11394
DNA (1242bp) protein (414aa)
seg (db=Seg db_id=seg from=12 to=45)
seg (db=Seg db_id=seg from=354 to=372)
seg (db=Seg db_id=seg from=234 to=249)
seg (db=Seg db_id=seg from=135 to=148)
ACD3_64_17
ACD3, Gracilibacteria, Bacteria

Not on your lists

11381..11845
DNA (465bp) protein (155aa)
seg (db=Seg db_id=seg from=24 to=33)
seg 24..33 Tax=ACD3
ACD3_64_18
ACD3, Gracilibacteria, Bacteria

Not on your lists

12073..13335
DNA (1263bp) protein (421aa)
seg (db=Seg db_id=seg from=103 to=117)
seg (db=Seg db_id=seg from=253 to=262)
seg (db=Seg db_id=seg from=333 to=353)
seg (db=Seg db_id=seg from=363 to=374)
ACD3_64_19
ACD3, Gracilibacteria, Bacteria

Not on your lists

13528..17448
DNA (3921bp) protein (1307aa)
DNA polymerase III, alpha subunit n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKH7_CALS8 (db=UNIREF evalue=0.0 bit_score=729.0 identity=40.42 coverage=72.8385615914308)
dnaE; DNA polymerase III DnaE
dnaE; DNA polymerase III DnaE
seg (db=Seg db_id=seg from=1084 to=1104)
ACD3_64_20

Not on your lists

17467..18060
DNA (594bp) protein (198aa)
putative glycosyltransferase (db=KEGG evalue=3.0e-15 bit_score=84.7 identity=35.56 coverage=64.1414141414141)
seg (db=Seg db_id=seg from=146 to=157)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=18 to=197 evalue=2.1e-20)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=31 to=172 evalue=4.1e-10)
ACD3_64_21
ACD3, Gracilibacteria, Bacteria

Not on your lists

18389..18679
DNA (291bp) protein (97aa)
seg (db=Seg db_id=seg from=76 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions 7..24 Tax=ACD3
ACD3_64_22
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(18722..21079)
DNA (2358bp) protein (786aa)
type ii secretion system protein e
coiled-coil (db=Coil db_id=coil from=13 to=34 evalue=NA)
seg (db=Seg db_id=seg from=154 to=168)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=361 to=652 evalue=2.7e-69)
Displaying 22 items

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