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gwa2_scaffold_314

Alias: GWA2_CP_megabin_Ab397_71

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_314_1

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comp(95..1870)
DNA (1776bp) protein (592aa)
Polymorphic membrane protein {ECO:0000313|EMBL:KKQ57830.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
ABC transporter substrate-binding protein precursor
Polymorphic membrane protein
gwa2_scaffold_314_2

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comp(1922..2644)
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57831.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_314_3

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comp(2848..7227)
DNA (4380bp) protein (1460aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57832.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
psrP; cell wall surface anchored protein
GK12566
gwa2_scaffold_314_4

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comp(7820..8500)
DNA (681bp) protein (227aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57833.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
gwa2_scaffold_314_5

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comp(8622..9197)
DNA (576bp) protein (192aa)
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:KKQ57834.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family
gwa2_scaffold_314_6

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comp(9229..10971)
DNA (1743bp) protein (581aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57835.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
gwa2_scaffold_314_7

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comp(10988..11854)
DNA (867bp) protein (289aa)
UTP-glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:KKQ57836.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
galU; UTP-glucose-1-phosphate uridylyltransferase
UTP-glucose-1-phosphate uridylyltransferase
gwa2_scaffold_314_8

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comp(11990..13108)
DNA (1119bp) protein (373aa)
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidyltransferase {ECO:0000313|EMBL:KKQ57837.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Glucose-1-phosphate thymidyltransferase
gwa2_scaffold_314_9

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comp(13114..13689)
DNA (576bp) protein (192aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57838.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
gwa2_scaffold_314_10

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comp(13872..14822)
DNA (951bp) protein (317aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KKQ57839.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
dTDP-4-dehydrorhamnose reductase
gwa2_scaffold_314_11

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comp(14797..15813)
DNA (1017bp) protein (339aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KKQ57840.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
spore coat protein
dTDP-glucose 4,6-dehydratase
gwa2_scaffold_314_12

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15975..16694
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57841.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
gwa2_scaffold_314_13

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comp(16799..17293)
DNA (495bp) protein (165aa)
dTDP-4-dehydrorhamnose 3,5-epimerase related protein {ECO:0000313|EMBL:KKQ57842.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
dTDP-4-dehydrorhamnose 35-epimerase-like protein
dTDP-4-dehydrorhamnose 3,5-epimerase related protein
gwa2_scaffold_314_14

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comp(17308..17751)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57843.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
gwa2_scaffold_314_15

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comp(17741..20419)
DNA (2679bp) protein (893aa)
Chaperone ClpB 1 {ECO:0000313|EMBL:KKQ57844.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
chaperone ClpB 1
Chaperone ClpB 1
gwa2_scaffold_314_16

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20660..22555
DNA (1896bp) protein (632aa)
membrane protease ftsh catalytic subunit (EC:3.4.24.- 3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000313|EMBL:KKQ57845.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
ATP-dependent zinc metalloprotease FtsH
gwa2_scaffold_314_17

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comp(22631..22870)
DNA (240bp) protein (80aa)
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:KKQ57846.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
glutaredoxin-like protein, YruB-family
Glutaredoxin-like protein, YruB-family
gwa2_scaffold_314_18

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comp(22957..23388)
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57847.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_314_19

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comp(23515..24312)
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57848.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
glucokinase
Putative glucokinase
gwa2_scaffold_314_20

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comp(24355..25335)
DNA (981bp) protein (327aa)
Hexose-6-phosphate isomerase {ECO:0000313|EMBL:KKQ57849.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Hexose-6-phosphate isomerase
Hexose-6-phosphate isomerase
gwa2_scaffold_314_21

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comp(25346..25720)
DNA (375bp) protein (125aa)
Nucleotidyltransferase substrate binding protein, HI0074 family {ECO:0000313|EMBL:KKQ57850.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_3
nucleotidyltransferase substrate binding protein, HI0074 family
Nucleotidyltransferase substrate binding protein, HI0074 family
gwa2_scaffold_314_22

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comp(25757..26044)
DNA (288bp) protein (96aa)
Polymerase beta domain protein region protein {ECO:0000313|EMBL:KKQ57851.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region
gwa2_scaffold_314_23

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comp(26067..26786)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57852.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
DSBA oxidoreductase
Putative oxidoreductase
cell wall localization (psortb). Best hits NCBi Jill Banfield (5/11/16)
possibly a protein disulfide oxidoreductase Jill Banfield (5/11/16)
gwa2_scaffold_314_24

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comp(26828..27562)
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57853.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
gwa2_scaffold_314_25

Not on your lists

comp(27658..28326)
DNA (669bp) protein (223aa)
DSBA oxidoreductase {ECO:0000313|EMBL:KKQ57854.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
DSBA oxidoreductase
DSBA oxidoreductase
cell wall localization (psortb) Jill Banfield (5/11/16)
gwa2_scaffold_314_26

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comp(28455..29843)
DNA (1389bp) protein (463aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57855.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
DUF399 weak hit. Overall sequence novel in NCBI Jill Banfield (5/11/16)
gwa2_scaffold_314_27

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comp(30020..31426)
DNA (1407bp) protein (469aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:KKQ57856.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Dihydrolipoyl dehydrogenase
gwa2_scaffold_314_28

Not on your lists

31573..33030
DNA (1458bp) protein (486aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57857.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Putative uncharacterized protein
AAA-like domain; This family of domains contain a P-loop motif (best domain hit NCBI), many OD1 hits. Jill Banfield (5/11/16)
gwa2_scaffold_314_29

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comp(33134..33574)
DNA (441bp) protein (147aa)
Vitamin K epoxide reductase {ECO:0000313|EMBL:KKQ57858.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Vitamin K epoxide reductase
Vitamin K epoxide reductase
NCBI domain hit and CxxC motif supports annotation. Best hits in NCBI are OD1 but hits are very distant. Jill Banfield (5/11/16)
gwa2_scaffold_314_30

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comp(33679..34053)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57859.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Putative uncharacterized protein
Displaying items 1-30 of 60 in total

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